ggKbase home page

PLM3-1_170_b2_sep16_scaffold_3260_5

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(5405..6811)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 467.0
  • Bit_score: 690
  • Evalue 9.50e-196
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 456.0
  • Bit_score: 450
  • Evalue 3.60e-124
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 467.0
  • Bit_score: 690
  • Evalue 1.30e-195

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAATCAACCGCTGTTATTGATAGTCGATGACGAGGCCGGGGTCAGGCAGTCGCTGCAGATGGTTTTTAACAAGAATTTTCGTGTTCTCGAGGCGAAGTCCGCCGACGAAACCCTGCGCAAGGTTGCGGATGAAAAGCCCGACCTTGTCTTGCTCGACATCGTCATGCCGGGCGAAGACGGACTTGCGGTGCTCAAACAAATAAAGTCGATCCAACCGGAATGCCAGATTATCATGCTGACCGGCCTGAACACCGCCCGGACGGCTTTCACCGCGAGATCGGCGGGCGCTTTCGATTACGTGACGAAGCCCTTCGATGTCGAAGAACTGCGAATGCGCGTCGAACGGGCAGTGGAGAAAGTTCAACTGTCGCGGGAATTGGAGCGGCTCAAGGAGGAGGTCGGGCGCAAGTACGGGATCGATCATGTCATTGGAAAGTCCAAACAGATCGTCGACGTGTTCAAGGCGGTGAGCATGGTGGCGGCGAAAAAGAGCACGGTGTTGATCATCGGCGAAAGCGGCACCGGCAAGGAGCTGATCGCCCGCGCGCTCCACTTCAACAGCGACCGGCGCTCCAAACCGTTCGTGGTCGTCAATTGCGCCGCCTTGCCGGACACGTTGATTGAAAGCGAAGTATTCGGCTACGAGAAGGGCGCGTTCACCAACGCTTCGCAGAAAAAAGTCGGCCGTTTCGAGCTGGCCCACGGCGGCACTCTTTTCCTCGATGAAATCGGGGAACTCAATCTCGGCACCCAGGCGAAGTTCCTGCGCGCCATTGAGCTAGAAACGTTTACCCGATTAGGCGGCAACGACGAAATCAAGGTCGACGTCCGCGTGATCGCCGCAAGCAATCGCGACCTCGAGCAGCTGGCCAAAGTGGGAGAATTTCGCCCCGATCTCTTCTACCGTCTGAATGTCGTTTCGCTGTTTTTACCGCCGCTCAGGGACAGGCCGGAGGACATTCCCCTGCTGCTCGATCACTTCCTGCGGCTCAAGGCGCATGAGCACTCGATCCTGGCCAAAGGCCTTTCCCCGGAGGTGGTGGATTTTTTCACGTCGTATCCGTGGCCCGGAAACATCCGCGAGCTGGAAAACTTGATTGAACGCCTGACGATATTGACGCCGCACGAAACGATCATGTTGCGCGATTTACCCCCGAGCATGCGGACGGCGGACCAGACCGCAACGCTCAAGGAGGACGTGCTCACGGGTGATCGCCCGCTCAGCGACGCGGTGGACGAGTTTGAACGCGAGCTGATCGTCAAAGCGCTGCAGCGCACCGGCTTCAACCAGACCAAAGCCGCCTCGCTTCTCGGCACCAGCCGCCGCATCCTCAAGTACCGCATCGAGAAGCTGAAGATCAACGAGCCCGAGGATGGCGACGACGCCGTTAAATTATCGACGTAA
PROTEIN sequence
Length: 469
MNQPLLLIVDDEAGVRQSLQMVFNKNFRVLEAKSADETLRKVADEKPDLVLLDIVMPGEDGLAVLKQIKSIQPECQIIMLTGLNTARTAFTARSAGAFDYVTKPFDVEELRMRVERAVEKVQLSRELERLKEEVGRKYGIDHVIGKSKQIVDVFKAVSMVAAKKSTVLIIGESGTGKELIARALHFNSDRRSKPFVVVNCAALPDTLIESEVFGYEKGAFTNASQKKVGRFELAHGGTLFLDEIGELNLGTQAKFLRAIELETFTRLGGNDEIKVDVRVIAASNRDLEQLAKVGEFRPDLFYRLNVVSLFLPPLRDRPEDIPLLLDHFLRLKAHEHSILAKGLSPEVVDFFTSYPWPGNIRELENLIERLTILTPHETIMLRDLPPSMRTADQTATLKEDVLTGDRPLSDAVDEFERELIVKALQRTGFNQTKAASLLGTSRRILKYRIEKLKINEPEDGDDAVKLST*