ggKbase home page

anamox2_curated_scaffold_8561_4

Organism: anamox2_Sphingobacteriales_41_11_curated

partial RP 39 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4622..5185)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8S8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 261
  • Evalue 5.70e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 261
  • Evalue 1.60e-67
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 261
  • Evalue 8.00e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
TTGAACGAACTTGATCTGATACAGCAACTCCGGGAAGGAGACGAACATGCATTTAAAACTCTGGTGGAAAGCTACCAGGACCTGGTTTATAATACCGCTTTGGGAATAGTGCAGAATGCGGAAGATGCCGAAGACATCTCACAGGAAGTGTTCATTAAAGTGTTTCGTTCTGTTCATACTTTCAAAGGAGAATCAAAAATCTCTACATGGCTGTATCGTATTACCGTTTCAACAGCATTGGATCTTTTACGAAGTAAGAAAAGCAAGAAGCGGTTCAGCTTTTTACAGCGGCTCTTCGGGGAGAATAATGAACCTTTGCAGGAAGTACCTGATTTTCACCACCCGGGAGTGGCGCTGGATCAGAAAGAAAACGCAGCTCGTTTATTTAAAGCCATAAATAAACTGCCGGAAAATCAAAAAGTAGCATTTACCCTGCATAAACTGGAAGATCTCAGTTACCAGGAAATTAGCGAGGTGATGAAAGTATCTGTTTCTGCCGTGGAATCACTGATGCACCGGGCAAAACAAAACCTTAAGAAAATACTGGAGAAAGATAATGAATAG
PROTEIN sequence
Length: 188
LNELDLIQQLREGDEHAFKTLVESYQDLVYNTALGIVQNAEDAEDISQEVFIKVFRSVHTFKGESKISTWLYRITVSTALDLLRSKKSKKRFSFLQRLFGENNEPLQEVPDFHHPGVALDQKENAARLFKAINKLPENQKVAFTLHKLEDLSYQEISEVMKVSVSAVESLMHRAKQNLKKILEKDNE*