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anamox2_curated_scaffold_2024_11

Organism: anamox2_Xanthomonadales_70_8_curated

near complete RP 50 / 55 BSCG 48 / 51 ASCG 9 / 38
Location: 11603..13279

Top 3 Functional Annotations

Value Algorithm Source
pnlA; Pectin/pectate lyase (EC:4.2.2.10 4.2.2.2) similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 387.0
  • Bit_score: 305
  • Evalue 2.20e-80
Pectin/pectate lyase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AJ80_CUPTR similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 387.0
  • Bit_score: 305
  • Evalue 7.90e-80
Pectate lyase {ECO:0000313|EMBL:KIH83089.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 401.0
  • Bit_score: 367
  • Evalue 3.10e-98

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Taxonomy

Pseudomonas batumici → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGGCGCTGTGCGTATCGTTGCCGCCCGCGCTGGCGCAGTCACTGGAACACTACCGCCTCGCGGTGCAAGGCAGCGGTCAGGTCGAGGTCTACATCAACGGCCACTACATCGGTCGCAGTGCCGAAGCCAGCCGCCTCGAACTGTATGCGCGCCACCTGCAGGCGGGCGAGAACGTCATCGCCCTGCGCGCCAGCAAGGGGGGCAATGCCGCGCCATTCGTCATGGCCGAACTGGGCGGCGACATCGGTCGCCTCGGCACCTCCCCACTGTGGCGCGTGCAATCGATGCCGGCGGATCTGGACTGGACGCTGCCGGGATTCGACGCCAGCAGTTGGCCGCAGGCCAGCGTGGTCGCCGCGATCCCGCCCGCAGGCTTCCCCACGGGCGGACCAGCCCTTGGGGTATGGTCCGCCACCGCGGCCGATTCCACCATCGCCTTGCGCGCGCACGTCTGGATGCCGACGGGCTCGGCACGCCTGCCACAGGGCTTTGCCCGCAACACCACGGGCGGCGCTGGCGGCGAAGTCGTGACCGTCGACACGCGGGAAGGCCTGGCCGCGGCACTGTGCTCAAGCATGCAGGGCAACGCCTGCACCGACGACACGCCTCGCATCATCCAGCTTGCCGGGACCATCGACTTCACCGGCAGCGAGGGCAGCGCCACGCGGCCAGGCTGCAACTACTCGAGTTGCCCCGCGCCGCTGGCCAACGAGCGCCTGGTGCTGCTCAACCCACAGGACACGCATTGCGATGGCAAGCCCGTGTTCGACATCACCTACGACGCCGCCGGCAACAATCCGCTGCGCGTCGGCTCGAACAAGACCCTGGTCGGCGTCGGCAACGATGCGGTCCTGCGTGGCAAGGGCCTGCGCATCAGCAACGGCGTCGACAACGTGATCATCCGCAACATCACCATCGAGCACATCAACAACGGCATCATCTTCGTGGGCGACGCCATCAGCATCAACGATGCCAGCCGCGTCTGGATCGACCACAACCGCTTCAACCGGATCGGACGCCAGTTCATCGTCACCGGCTATGGCGCAGCCACGGATGTCACGATCTCATGGAACGATTTCGACGGCCGCAACGAGGTCTCGCATTACTGCGACGGGCGCCACTACTGGAATCTGCTGCTGCTGGGCAATGGCGATGAAATCGGCCTGTACAACAACTGGATCCGCCATTTCTCCGGACGTGCACCCCACGCGGGCGCGGGTGGCAATCACATGTCGCTGCTGCATGTTGCCGGCAACCTGTTCGAGGACGGCTACTGGCATGCGCTGGACATCGGGCAACCGGTGCGCGCCCTGGTGGAAGGCAACACTTTCCACACGGTCAGCGTACCCATTTTGGATGGCGGCGATCCCGGCTTCGTCTGGGCCGACAAGGAGCCGCCGACCGCGGGCCACCAAGCCCTGTGCGGGCAGTGGCTGGGCCGCTCCTGCGTGGGCAATCCGCTGGTCGAGCAGCCGCAGGGATGGGACGACAACTTCCGCAGCGACCTCATCGTGCTGGGCGACTTCTCCAGCCACAGCGACACGCTCGACCGGCCCGGTCCGGAACCGGCGCAGGCCGCTGCGCTGATGGTGCCGTTCCTGGCCGGACCCGGGCACCTCGGCAACGACCAGATCGTGCTCGACGATGTGGTGTTCAACAACGGCTTCGAGCCCTGA
PROTEIN sequence
Length: 559
MALCVSLPPALAQSLEHYRLAVQGSGQVEVYINGHYIGRSAEASRLELYARHLQAGENVIALRASKGGNAAPFVMAELGGDIGRLGTSPLWRVQSMPADLDWTLPGFDASSWPQASVVAAIPPAGFPTGGPALGVWSATAADSTIALRAHVWMPTGSARLPQGFARNTTGGAGGEVVTVDTREGLAAALCSSMQGNACTDDTPRIIQLAGTIDFTGSEGSATRPGCNYSSCPAPLANERLVLLNPQDTHCDGKPVFDITYDAAGNNPLRVGSNKTLVGVGNDAVLRGKGLRISNGVDNVIIRNITIEHINNGIIFVGDAISINDASRVWIDHNRFNRIGRQFIVTGYGAATDVTISWNDFDGRNEVSHYCDGRHYWNLLLLGNGDEIGLYNNWIRHFSGRAPHAGAGGNHMSLLHVAGNLFEDGYWHALDIGQPVRALVEGNTFHTVSVPILDGGDPGFVWADKEPPTAGHQALCGQWLGRSCVGNPLVEQPQGWDDNFRSDLIVLGDFSSHSDTLDRPGPEPAQAAALMVPFLAGPGHLGNDQIVLDDVVFNNGFEP*