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anamox3_curated_scaffold_19057_2

Organism: anamox3_Bacteria_66_7_curated

near complete RP 47 / 55 BSCG 45 / 51 ASCG 9 / 38
Location: 229..2571

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 782.0
  • Bit_score: 1199
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI000362A896 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 782.0
  • Bit_score: 1204
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 776.0
  • Bit_score: 1165
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2343
ATGACCGCCTCGGAAGGGGTGCGCCAAGTTCTCGGCCTCGACGCCGCGAGCGAGGCCGCCAGCATCAGCATCCGCGTCGCTGCGCCCGACGTGATGCGCTCCTGGAGCCGCGGAGAAGTCAAGAACCCCGAGACGATCAACTATCGCACGTTCAAGCCGGAGAAGGGCGGCCTCTTCTGCGAACGCATCTTCGGGCCGATCCGGGACTGGGAGTGCAACTGCGGCAAGTACAAACGGATCAAGCACAAGGGAGTGATTTGCGACCGTTGCGGCGTGGAGGTCTGCCTCTCGCGCGTCCGCCGCGAGCGCATGGGCCACATCGACCTCGCCGTGCCGGTGTCGCACATCTGGTTCTTCAAGTGCATGCCGAGCCGCCTCGGGATGGTGCTCGACATGACGGGGCGGCAACTCGAGCGGATCATCTATTACGAGGATCATGTCGTCATCGATCCGGGGAGCACGCCGCTCAAGGCGCGCAGCCTCCTCAACGAGATCGAGTACCGTCGCGCGCGCGAACAGTATGGCGACGACTTCAAGGCCGGGATCGGCGCCGAGGCCGTGAACCATCTCCTCAAGGAGATCAAGATCGAGGAAGAGATTAAGCGCATCCGGAAGGCCATGGGCGCCACGAAGAGCAAGCAGGTGAAGAAAAAGCTCTCGATGCGCCAGAAGCTCCTCGAAGGTTTCCTCGCCTCGGAGTCGCGCCCCGAGTGGATGATCCTCACCGTCCTGCCGGTGATCCCGCCCGATCTGCGGCCGCTGGTGCCGCTCGAAGGCGGCCGTTTCGCGACCTCCGATCTCAACGATCTCTACCGTCGGGTGATCAACCGCAACAACCGCCTCAAGCAGCTTTTGAGCCTGAAGACCCCCGAGGTCATCATCCGCAACGAGAAGCGCATGCTTCAGGAGGCGGTGGACGCCCTCTTCGACAATGGACGACACGGCCGCCCCGTCACGGGCGCGGGCAACCGTCCGCTCAAGTCGCTCTCGGACATGCTCCGCGGCAAGAGCGGACGTTTCCGCCAGAACCTGCTCGGCAAACGCGTGGACTACTCGGGCCGCTCCGTGATCGTCATCGGGCCCGAGCTCCGCCTCAGCCAGTGCGGGCTGCCGAAGAAGATGGCCCTCGTCCTCTTCGAGCCGTTCATCATCCGCCGACTCAAGGAGATGGGGAAGGTGCATACGATTCGCAGCGCCAAGAAGATGATCGAACGGCAGGAGCCGGAGGTGTGGGACATCCTCGACGAGGTGACGCGCGGTCATCCGGTCCTCCTGAACCGCGCTCCGACGCTCCACCGCCTTTCGATTCAGGCCTTCGAGCCGGTCCTCATCGAGGGCGAGGCGATCCGCATTCATCCGCTGGTTTGCACCGCCTACAACGCCGACTTCGACGGCGACCAGATGGCCGTGCATATCCCGCTGTCCATCGAGGCGCAGCTCGAGGCGCGCCTCTTCATGATGGCGACGAACAACATCTTCAGTCCGTCGAGCGGAAAACCGATCACCACGCCTTCCCAGGACATCACGCTGGGGTGTTACTACCTCACGCAGAACCCGCGTGGAGCGGGCGAGGGGGAGCGCAGGACGGCGCCGAAGACCTTTGCCGATATGGACGAAGTCTTTTTCGCGCGCGACGCGGGAATGGTCCGGCCGCACGAAGGCATCCGGATCCGCAATCCGGACTTCGGCCGCGACACCGTTTACGGCGACAAGGCGAAACGCGTCCTCGAGACCACCGTCGGGCGCGTGGTGTTCAACAGCATCTGGCCGCGGGAACTCGGTTTCTTCAATAAGCCGGTCAACAAGAAACAGCTCGGCGACGTCATCTGGCGTTGCTTCCAGACCGTGGGCCACGCCCGCACGATCGAGACCTTGGATCGTCTGAAGGAACTCGGATTCACGGAAGCCACCCGGGCGGGCATCTCGATTGGGATTGACGACATGATCATTCCCGAGAGCAAAGAGGCGGAGATCAAGGAGGCGCAACGCAGCATCGGCGAGGTGGAGAAGCAGTACCGCAACGGCATCATCACCAATGGCGAACGCTACAACAAGATCGTGGACGCCTGGACGCACGCCACCGACAACATCGCCAGCGTGCTCTTCAGCACCTTGCGCGACAACCGGAAGAAGGCGGAGTTCAACCCGCTCTTCCTCATGGTGGACTCGGGCGCGCGGGGCAATCGCACCCAGGTGCGCCAGCTCGCGGGCATCCGCGGATTGATGGCCAAGCCTTCGGGCGACATCATCGAGCGCCCGATCCTCTCGAACTTTCGCGAGGGGCTTTCCGTGCTCGAATACTTCATCTCGACGCATGGCGCGCGCAAAGGTTTGGCCGATACC
PROTEIN sequence
Length: 781
MTASEGVRQVLGLDAASEAASISIRVAAPDVMRSWSRGEVKNPETINYRTFKPEKGGLFCERIFGPIRDWECNCGKYKRIKHKGVICDRCGVEVCLSRVRRERMGHIDLAVPVSHIWFFKCMPSRLGMVLDMTGRQLERIIYYEDHVVIDPGSTPLKARSLLNEIEYRRAREQYGDDFKAGIGAEAVNHLLKEIKIEEEIKRIRKAMGATKSKQVKKKLSMRQKLLEGFLASESRPEWMILTVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKQLLSLKTPEVIIRNEKRMLQEAVDALFDNGRHGRPVTGAGNRPLKSLSDMLRGKSGRFRQNLLGKRVDYSGRSVIVIGPELRLSQCGLPKKMALVLFEPFIIRRLKEMGKVHTIRSAKKMIERQEPEVWDILDEVTRGHPVLLNRAPTLHRLSIQAFEPVLIEGEAIRIHPLVCTAYNADFDGDQMAVHIPLSIEAQLEARLFMMATNNIFSPSSGKPITTPSQDITLGCYYLTQNPRGAGEGERRTAPKTFADMDEVFFARDAGMVRPHEGIRIRNPDFGRDTVYGDKAKRVLETTVGRVVFNSIWPRELGFFNKPVNKKQLGDVIWRCFQTVGHARTIETLDRLKELGFTEATRAGISIGIDDMIIPESKEAEIKEAQRSIGEVEKQYRNGIITNGERYNKIVDAWTHATDNIASVLFSTLRDNRKKAEFNPLFLMVDSGARGNRTQVRQLAGIRGLMAKPSGDIIERPILSNFREGLSVLEYFISTHGARKGLADT