ggKbase home page

anamox3_curated_scaffold_9010_4

Organism: anamox3_Sphingobacteriales_44_6_curated

near complete RP 44 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: 3608..4240

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ24_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 186.0
  • Bit_score: 139
  • Evalue 2.80e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ24609.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 186.0
  • Bit_score: 139
  • Evalue 3.90e-30
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 191.0
  • Bit_score: 135
  • Evalue 1.50e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 633
GTGACTTATAGCTGTTATATTGAATTCATTTCGTACTTGAAAGATAAACTGTCATATGAGGAAAAGGATTTGCTTCGCCAGGTTGCTGCGGGCAATGAAGCTGCTTTCAGAAAGTTATTGCATTTGTATGGTGATCGTTTCTATGCCGTTGCCAAAAAAATGACCCGCTCTGAAGACGTAGCTAAAGATATCGTGCAGGACGTTTTTATTAGTATATGGGAAAAGCGACGGGTTCTGAACGACGTTAAGAATCCTGCCTCGTATTTTTTTACCATCATTTACAGGCGTATATATACCCATTTCCGGAAGATAGCTTCCGAAAGAAATGTGTTACATATCGTTTCCGCAGAAAGTCAATATGAAAGCCCGCCGGAAGATAAAGTGTTGGCAAAAGAAGATCAGGAACTAATAAACGCTGCAATTGCTCAACTGCCACCCAGGCAGCAACTGGTATTCCGGTTAAGTAAACAGGAGGGGTTGAGCCGGGAAGATATTGCGATGCGATTAAATGTATCGCCCAACACGGTCAAAAACCATCTGGCGGATGCTATAAAGTCCATCAAAATATTCCTGCTTAAATCTTACAATTTGCTGATTATCCTGTTTTTTTTCAAAAAAGATCTTTTCGGGTAG
PROTEIN sequence
Length: 211
VTYSCYIEFISYLKDKLSYEEKDLLRQVAAGNEAAFRKLLHLYGDRFYAVAKKMTRSEDVAKDIVQDVFISIWEKRRVLNDVKNPASYFFTIIYRRIYTHFRKIASERNVLHIVSAESQYESPPEDKVLAKEDQELINAAIAQLPPRQQLVFRLSKQEGLSREDIAMRLNVSPNTVKNHLADAIKSIKIFLLKSYNLLIILFFFKKDLFG*