ggKbase home page

anamox1_curated_scaffold_2315_2

Organism: anamox1_Bacteria_56_37_curated

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(1613..2245)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4B0_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 216.0
  • Bit_score: 232
  • Evalue 2.40e-58
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 216.0
  • Bit_score: 232
  • Evalue 6.90e-59
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 216.0
  • Bit_score: 232
  • Evalue 3.40e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldilinea aerophila → Caldilinea → Caldilineales → Caldilineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCAAATAAAATTCCGGCGGTGTTGCCGGATGAGACCGAGCGCGCTTTTATTGAACGGCTGCGCGCGGGCGACCCCGCCGCGTGCGCGCAATGCGTCCGTGAACATTCCGACGGTTTGTATCGCGTCGCGCGGCGCATGATGCGCGACCCGCACGAAGCCGAAGATGTCTTGCAAGAAACTTTTCTCAACGCGTTCAAAGGCATCGCGCAGTTTGACGGACGTTCGAGTTTGAAAACGTGGTTGTACCGGATTTGCTACAACACCGCGTTGATGAAATTGCGCGGCAACAAACCGCCGCGCGTCTCGGTGGAAGATACGCTGGACGCCGCCGAACAGGGCGGTCTTTTGCCCCAAGCGCTGCACGATTGGTGTTGTTTGCCGGAACGCGAATTTGAAACGAATGACACGCGCGCGCAACTCGAAAACGCGCTGCGCGCGCTGCCCGAAAATTCGCGCATCGTCTTTGTGCTGCGCGAATTAGAGGGCCTCTCCACCATCGAAACCGCCAACGCGTTGAGCATTTCCGAGCAAGCGGTCAAAGTGCGTTTGCATCGCGCGCGTTTGGCGTTGCGCGAACGCCTCGCGGATTATTTTGCCGATTTGACGCCCGCGCGCCAAGCTAAAATGTAG
PROTEIN sequence
Length: 211
MANKIPAVLPDETERAFIERLRAGDPAACAQCVREHSDGLYRVARRMMRDPHEAEDVLQETFLNAFKGIAQFDGRSSLKTWLYRICYNTALMKLRGNKPPRVSVEDTLDAAEQGGLLPQALHDWCCLPEREFETNDTRAQLENALRALPENSRIVFVLRELEGLSTIETANALSISEQAVKVRLHRARLALRERLADYFADLTPARQAKM*