ggKbase home page

anamox1_curated_scaffold_55_28

Organism: anamox1_Bacteria_56_37_curated

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(24464..24793)

Top 3 Functional Annotations

Value Algorithm Source
Winged helix family Two component transcriptional regulator Tax=Clostridium RepID=E7GIB0_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 103.0
  • Bit_score: 83
  • Evalue 1.20e-13
Putative KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:ERI77617.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 103.0
  • Bit_score: 83
  • Evalue 1.70e-13
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 103.0
  • Bit_score: 74
  • Evalue 1.60e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
GTGGATGAGCACAACGCACAACTGCGAATTGATTTGCAGTCACACCGTCTGTGGCTCGCGGAGGAGGAGATCCACTTGACACGATTGGAATTTGAGATATTAGAGTGCCTGGTAAATCGGCTTGGACAAATTGTTACCTACCAAGAGCTGTGGCGCTCGGTCTGGAAATGCTCAAACCCAATACAAGAGGATGACTACACCGCGATGCGGCAAGCGATAAAGCGCCTACGGCGCAAGTTACGCGAGGATTGGCAAAAACCGAAATTTATTTTTTGCAAATGGGGAATCGGATTTCGCCTTTCGGAAGATGCAGTGGGGATTATAGATTGA
PROTEIN sequence
Length: 110
VDEHNAQLRIDLQSHRLWLAEEEIHLTRLEFEILECLVNRLGQIVTYQELWRSVWKCSNPIQEDDYTAMRQAIKRLRRKLREDWQKPKFIFCKWGIGFRLSEDAVGIID*