ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

anamox1_curated_scaffold_3118_9

Organism: anamox1_Bacteria_64_7_curated

near complete RP 47 / 55 MC: 3 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(6805..7368)

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 183.0
  • Bit_score: 282
  • Evalue 8.80e-74
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:BAM02877.1}; EC=4.2.1.33 {ECO:0000313|EMBL:BAM02877.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 183.0
  • Bit_score: 282
  • Evalue 4.40e-73
3-isopropylmalate dehydratase small subunit Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IC89_PHYMF similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 183.0
  • Bit_score: 282
  • Evalue 3.10e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phycisphaera mikurensis → Phycisphaera → Phycisphaerales → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCACCGTCATCACCGGCAAAGCGTACGTCCTTGGCGACGACATCGACACCGACCAGATCATCCCCGCCGAGTATCTTTCCTTTAACCCCTCGGACGCGGACGAGAGGAAGTACTTCGGCATGTACGCGATGGTCGGCGTCCCCCCCAAGCAGGCCGGCCTGCCCAAGGGCAACACCCGGTTCGTACCCGAGGGGCAGTTCAAGAGCGAATACACCATCGTCATCGGCGGTAAAAACTTCGGTTGCGGCTCTTCACGCGAGCACGCCCCCCTCGCCATCGCCGAAGCCGGCGCCAAGGTCGTCGTTGCCGAGTTCTACGCCCGCATCTTCTTCCGCAACTGCGTCAACGGCGGCTACCTGCTCCCCTGTGAGTCCGTCCAGCGACTGGTAGAAGAAATCAAGACCGGCGACGAATGCTCCGTGGACATCGACAACGGCACACTGGTCAACAAGACCAACGGCAAGAGCTACAAGCTCCGTCCGCTAGGGGACGTCAAGCCGATCGTCGATGCGGGCGGCGTGTTCAACTACGCCCGCAAGGCCGGAATGCTGGCGAAATAG
PROTEIN sequence
Length: 188
MSTVITGKAYVLGDDIDTDQIIPAEYLSFNPSDADERKYFGMYAMVGVPPKQAGLPKGNTRFVPEGQFKSEYTIVIGGKNFGCGSSREHAPLAIAEAGAKVVVAEFYARIFFRNCVNGGYLLPCESVQRLVEEIKTGDECSVDIDNGTLVNKTNGKSYKLRPLGDVKPIVDAGGVFNYARKAGMLAK*