ggKbase home page

anamox1_curated_scaffold_3759_10

Organism: anamox1_Bacteria_64_7_curated

near complete RP 47 / 55 MC: 3 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(7663..8859)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 394.0
  • Bit_score: 352
  • Evalue 7.30e-94
Transcription termination factor Rho Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SYT6_PLAL2 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 394.0
  • Bit_score: 352
  • Evalue 5.20e-94
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 394.0
  • Bit_score: 352
  • Evalue 1.50e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGCAAACCCAGACCGGAATTCTCGAATTGTCAGGCCGCCCCGACGGGCGGCTTCGCGTCCTGGACAAGACCCTCATCGCCCAGCCCACCGACCCCGTGGTCCCGGCGAAGTTCATTGAACGCTTCGGGCTGCGCTCGGGCCTCACCATCGAGGCTGAATTGCAGCAGACCGGCGGCAACGGGCACCACCACCATCATCACCACCAGCAGCAGGGCAAGAAGAACAAGATGGCCAAGTACAACGCCATCGCCCCCAACGCCCCACGCGTGCAGCAGGTGTTGACGGTCGATGGCGTCAGCCCGGACGAGTTCACCAAGCGGCGCAAGTTTGAAGACCTGACCACCATCGACCCCAAGCCGCGGATGGTTCTTGAGTACCCCGGCTGTCCGCCCGCCTGCCGACTCATCGACCTCTTCTGCCCCATCGGGTACGGGCAGCGCGCCATGATTGTTTCGCCCCCCAAGGCCGGCAAGACCACGCTGCTGCAGAACATCGCCTTTGCCGTTCAGAAGAACCACCCGGGAGTGCATGTGATCGCGCTGCTGGTGGACGAGAGGCCCGAGGAAGTCACGGACTTCCGCCGCAATGTCCCCTGTGAGGTACTCGCCAGTTCCAACGACCACACCGCCGAGAAGCATGTCGCGCTGGCGATGCTCACCATCGACCGTGCCAAGCGCATGGCGGAGTCCGGGAAGGATGTTGTCGTGCTGCTCGACTCGCTGACCCGCGTGGGTCGTGCGTTCAACACCGCCCAAGGAATCCACCAGACGGGCCGCACGCTCTCCGGCGGTCTCGACGCCTCGGCGCTGGCGATCCCCAAACAGCTCTTCGGTGCTGCCAGAAAATTCGAGGAGGGCGGTTCGCTCACCATCATCGCCACCGCACTGGTGGACACCGGCTCACGCGGCGATCAGGTCATCTTTGAGGAGTTCAAGGGCACCGGCAACATGGAGCTGATCCTCGACCGCAAGATCGCCGAGCGACGCCTCTTCCCCGCGATCGACCTGGCGGCCTCGGGCACGCGCAAGGAACACCTGCTGCTGCCCCCCAAGGAGTTGGAGACGATGTCCGCCCTGCGCCGCCGCCTGATCCAGATGCCCCCACCACAGCAGATCGAGCAGTTGCTCAAGGCGCTCGAGCGATTCAAGACCAACGCCGATCTGGTCGGTTCGCCCAATTCCCCGGCCAATACGTAA
PROTEIN sequence
Length: 399
MQTQTGILELSGRPDGRLRVLDKTLIAQPTDPVVPAKFIERFGLRSGLTIEAELQQTGGNGHHHHHHHQQQGKKNKMAKYNAIAPNAPRVQQVLTVDGVSPDEFTKRRKFEDLTTIDPKPRMVLEYPGCPPACRLIDLFCPIGYGQRAMIVSPPKAGKTTLLQNIAFAVQKNHPGVHVIALLVDERPEEVTDFRRNVPCEVLASSNDHTAEKHVALAMLTIDRAKRMAESGKDVVVLLDSLTRVGRAFNTAQGIHQTGRTLSGGLDASALAIPKQLFGAARKFEEGGSLTIIATALVDTGSRGDQVIFEEFKGTGNMELILDRKIAERRLFPAIDLAASGTRKEHLLLPPKELETMSALRRRLIQMPPPQQIEQLLKALERFKTNADLVGSPNSPANT*