ggKbase home page

anamox1_curated_scaffold_2119_11

Organism: anamox1_Bacteria_64_7_curated

near complete RP 47 / 55 MC: 3 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 11503..13128

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 485.0
  • Bit_score: 397
  • Evalue 2.10e-107
Ribosomal protein S12 methylthiotransferase RimO Tax=Singulisphaera acidiphila RepID=L0DKX8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 485.0
  • Bit_score: 397
  • Evalue 1.50e-107
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 485.0
  • Bit_score: 397
  • Evalue 4.20e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1626
ATGGCCAAATCACCTTCGTCAAAGTCCCCCTCCCAACAAACGCGGCGCGCCAAGGCGGCGCCATCGGGGCGGGTACGCTCGAAGAAGGTTGCACGAACCGCCCAATCCACCGCAAGGCGGCCGATCCAGACCGTTTCCTTCGTCAGCCTCGGCTGTCCGAAGAACTTGGTGGACAGCGAGAAGATGCTGGGCCTGCTGGCGGAGGATGGCTTGGTGCCGGTATCGCACGGCCAAGCCGCCGATGCCGTGGTGGTGAATACCTGCGGCTTCCTGGAAGCTTCCAAAGAGGAATCCGTCGCCGAGATACGTGCGGCGGCAAAGCTCAAAGCGTCGGGGATAATCCAGCGGCTGATCGTCGCAGGCTGCCTCGTGCAGCGGCATCGGGCGAAGATGCTGGACTGGTGCCCGGACATTGACGCGATGGTTGGCGTGTTCGACCGCGATCGTATTGTCGAGGCTGTCCGTGGTGCGGGTGGGCGCGAGCAGCGAAACGACCTGCATATCGAGTTGCCCGTGTATTCAAGCATCGCGGCGAATGCGACGGCGGCTCGCAAGGATCGAGGCCTCACCGAGAAGAGCGAAGAGGGCAGGGGGTATTTCGAGTCCGATGCCGCTCGCATGCGGCTCACGCCCCGTCACTATTCTTACCTCCGCGTTTCCGAGGGGTGTAACCAGAACTGCGCGTTCTGCACGATCCCCTCGATCCGGGGCAAGATGCGTTCCAAGCCGGTCGACCGCATCCTCGCCGAGGCCCGCGAACTGATCGCCGATGGTGCGGTGGAGTTGAACCTCATCGGCCAGGATACGACGAGCTTCGGTCAGGACATCGGCTACGGCGGGGGGCTCGCAGGTATGCTGCGTGAGCTGGACCGCTGCGTCCGCGAGAATGCGGGCGTGGGCTGGGTGAGGCTGATGTACGCCTATCCCTCTTGTTTCACGGATGAGATGATCGAAGCCATCGCGTCGCTGCCGACGGTGGTGAAGTACATCGACATGCCGTTGCAGCACATCAACGATCAGGTGCTCGACCGCATGCGTCGCAAGACCAGTCGCAAGCTTATCGAGACGCTGCTGGCGAAGCTGCGGAAGGTGCCGGGCATGGCGATCCGTACGACCTTCATCTCCGGCTTTCCTGGTGAGACAGACACGCAGCACCGCGAACTGGTGGCTTTCGTGAAGGATTTCGGGTTTGACGCGATGGGGGTGTTCCCCTATTCGCCCGAGCCGGGCACGCCCGCCGGGACGATGCATGAGAAGGGCGGGGCCCTCAATGAAGACGTGGTGCAGGGCCGCGTCGATGAGTTGATGCGGGTGCAGCAGGAGGTGGCGTTTGCTCGAAACCGTGCCTCTGCGGAGAGGGGTGAGACGCTGGATGTGCTGATCGACGGCGCGACGAAGTCGGCGGGCCGATCGACGGCGGGCGTGGGCAAAGGTGGTCGGCTGTTCGTCGGTCGCGGCCCTAATCAGGCGCCGCAGATTGACGGCGTGACCTATGTGCAGTCCCGCCAGACGCTGTCGCCCGGCGAGATCGTGCGCTGCAAGCTGGTGGATGCGGATGGCTATGACCTGATCGCCCGGCCCGTCGAGGAGATCGGGTCCACCTTGTCGCTGCCTGTCGTACGGTGA
PROTEIN sequence
Length: 542
MAKSPSSKSPSQQTRRAKAAPSGRVRSKKVARTAQSTARRPIQTVSFVSLGCPKNLVDSEKMLGLLAEDGLVPVSHGQAADAVVVNTCGFLEASKEESVAEIRAAAKLKASGIIQRLIVAGCLVQRHRAKMLDWCPDIDAMVGVFDRDRIVEAVRGAGGREQRNDLHIELPVYSSIAANATAARKDRGLTEKSEEGRGYFESDAARMRLTPRHYSYLRVSEGCNQNCAFCTIPSIRGKMRSKPVDRILAEARELIADGAVELNLIGQDTTSFGQDIGYGGGLAGMLRELDRCVRENAGVGWVRLMYAYPSCFTDEMIEAIASLPTVVKYIDMPLQHINDQVLDRMRRKTSRKLIETLLAKLRKVPGMAIRTTFISGFPGETDTQHRELVAFVKDFGFDAMGVFPYSPEPGTPAGTMHEKGGALNEDVVQGRVDELMRVQQEVAFARNRASAERGETLDVLIDGATKSAGRSTAGVGKGGRLFVGRGPNQAPQIDGVTYVQSRQTLSPGEIVRCKLVDADGYDLIARPVEEIGSTLSLPVVR*