ggKbase home page

anamox1_curated_scaffold_1834_14

Organism: anamox1_Bacteria_64_7_curated

near complete RP 47 / 55 MC: 3 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(20732..22003)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 249.0
  • Bit_score: 247
  • Evalue 5.50e-63
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 249.0
  • Bit_score: 247
  • Evalue 2.70e-62
Pseudouridine synthase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHY5_PHYMF similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 249.0
  • Bit_score: 247
  • Evalue 1.90e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phycisphaera mikurensis → Phycisphaera → Phycisphaerales → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1272
GTGCAGGACCCCGATGAGGCCGATGTTCTCTTCGGCGAGGACGCAGACCGACGTCGCATCGTTTCCCGCAACAAGAACCGCACACGGCTGGATGTTTTTCTCTTCCACCGCCTCAAGGGAATCAGCCGCAGCAAGATTCAGCGGCTCATCGAACTCGGTGGGGTCACGGTCAATGGCCAGACCCCCAAACCGAGCACGAAAATCCAGGCCGACGACGTCATTGACATCATCCTTCCGCCGCCCGCTGTCCGCCGCATCGAGCCCGAAGATATCCCCCTTGATGTGATCCACGAGGACGAAAGCCTCATCGTCATCAACAAGCAGGCGGGGCTCATCGTCCACCCGGCGCGCAGCCACCTTTCGGGTACGCTGCTCAACGGGCTTGCTTGGCGGTTCAAGCAGCAGGTCGAGAGCAACGGGGGCACGTTCGTCAGCCGCACCACGCGTGGCTTCAAGCCCGCCGGAGGCCCGGGTGACGTCGTAACCAGTCGCGATTCTGAAATTCCAGAGAACCCTGAAGAAGGCCGCATTGAAGGGTTGAGTTCCGTCGGCGCTCAGGAGTTCCGTCCGGGCATCGTACATCGCCTCGATCGCTACACCACGGGCGTCATGGTCGTCGCAAAATCAGACGACGCCCACTGGGCCATCGCAAAGCAGTTTGAGAATCGGTCCACCCACAAGTGCTACCTCGCTCTTGTCCACGGCAACCTCGACATGCACGGCGGGGCGATCGAGTTCCCCATAGGCAAGCATCCGAGCTACCGCGAGGCGATGGCGGTGCGGCATGATTCAACAGGCAAGTACGCCCTGACGCTCTTCCGTGTGCGCGAGCAGTACCGCGGCTTCGCGCTGGTGGAGCTGGAAATCAAAACGGGACGCACGCACCAGATCCGTGTGCACATGTCCTACATGGGGCATCCGATCGTGGGCGACATCCTTTACGGCGGCGAGGCGATCGGTCGATCCGATCTGGACCACCCGCCCGTGCCGATGGGGCCAAGGCCGTTTGTGACGTTTGCGAGGGAGAAGTCCGAGGGGAAGCGGGTCGAGGCCAAGGCCGCCGCACGGGGGGACCTGCTGCTCGCCCACCCCGCGTTGCACGCGGCCATGCTGAGCTTCACACACCCAGCGACGAAATCGCCCGTGACCTACACCGCCCATCTTCACGAGCCGCTGCTGTCAATCATCCACGAACTGCGGAGCCGCCGCGTCGATGCCCCCGTGGCCACGGAGGGTTACTGGGTGAATCTTGATGAGGCGGTCCCCAAATGA
PROTEIN sequence
Length: 424
VQDPDEADVLFGEDADRRRIVSRNKNRTRLDVFLFHRLKGISRSKIQRLIELGGVTVNGQTPKPSTKIQADDVIDIILPPPAVRRIEPEDIPLDVIHEDESLIVINKQAGLIVHPARSHLSGTLLNGLAWRFKQQVESNGGTFVSRTTRGFKPAGGPGDVVTSRDSEIPENPEEGRIEGLSSVGAQEFRPGIVHRLDRYTTGVMVVAKSDDAHWAIAKQFENRSTHKCYLALVHGNLDMHGGAIEFPIGKHPSYREAMAVRHDSTGKYALTLFRVREQYRGFALVELEIKTGRTHQIRVHMSYMGHPIVGDILYGGEAIGRSDLDHPPVPMGPRPFVTFAREKSEGKRVEAKAAARGDLLLAHPALHAAMLSFTHPATKSPVTYTAHLHEPLLSIIHELRSRRVDAPVATEGYWVNLDEAVPK*