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anamox1_curated_scaffold_4788_2

Organism: anamox1_Bacteria_65_5_curated

partial RP 33 / 55 MC: 2 BSCG 31 / 51 ASCG 8 / 38
Location: 1218..1760

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 182.0
  • Bit_score: 136
  • Evalue 2.20e-29
2''-5'' RNA ligase Tax=Sphingobium sp. AP49 RepID=J2KUX7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 182.0
  • Bit_score: 136
  • Evalue 1.60e-29
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 180.0
  • Bit_score: 134
  • Evalue 2.20e-29

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCCGCGCCTGTTCACGGCCATCATTCTGCCCGAAGCAGCCCGAGCGGCCCTGGCCGCGCTGAAGGCCCCCATCGCGGGCGCCCGCTGGACCACGCAGGATCACCTGCACCTGACACTGAACTTTATCGGAGACGTGGACGACGCCCGGGCAGCGGCGGCGCAGGACGCTTTGCAGACGGTGCGAAGCCCGGCGTTTGACCTGGCACTGGCCGGCGCGGGCAGTTTTCGCGGCCGCGACGGCGCAATCCTGTGGGCCGGCTGCCATGGCGGCCCCGCTTTGCCGGCCCTGCATGGTGTGTTGCGCCAGGCACTGAGGGCAGCCGGCTGCCGACTGGAAGAACGCGCCTATGCCCCGCACATCACGCTGGCAAGGGTGAAGGGCAAGGCCGGCCCGGATGCCGAGCGATGGGTGAAGCAGCACGGCACGCTTGCTCTGCCGGCATTCCGCGTGTCCGAGTTCGCGTTGCTGGAAAGCCGTCCCCGCGGTCCCGGTTCCCGGTATCAGACCCGCGCCACGTTTGCGCTTCAGGACGGGCGGTAG
PROTEIN sequence
Length: 181
MPRLFTAIILPEAARAALAALKAPIAGARWTTQDHLHLTLNFIGDVDDARAAAAQDALQTVRSPAFDLALAGAGSFRGRDGAILWAGCHGGPALPALHGVLRQALRAAGCRLEERAYAPHITLARVKGKAGPDAERWVKQHGTLALPAFRVSEFALLESRPRGPGSRYQTRATFALQDGR*