ggKbase home page

anamox1_curated_scaffold_17938_1

Organism: anamox1_Bacteria_65_5_curated

partial RP 33 / 55 MC: 2 BSCG 31 / 51 ASCG 8 / 38
Location: comp(2..478)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 159.0
  • Bit_score: 149
  • Evalue 2.90e-33
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 159.0
  • Bit_score: 141
  • Evalue 1.20e-31
hypothetical protein Tax=Deinococcus aquatilis RepID=UPI0003764882 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 160.0
  • Bit_score: 143
  • Evalue 1.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 477
ATGCGCCGCATTCTGCTTGAGGTTGAGTACCACGGACAGCACTTCTTCGGCTGGCAGCGCCAGGGGCCCGCGCGCAGCGTGCAGGCCACACTCGAGGCCGCCATTGCCGATCTGGTCGGCCAGGCCGCAGAAGTTCACGGCGCAGGCCGCACCGACCGCGGCGTGCACGCCCTGGCCATGCCCGCCCACGTGGATGTGGACACGCGACTGCGCTGCGATGAAATTGTGATGGCCCTGAATGCCCGCCTGCCCGGCGACTGCGCCGTGCGCACAGCACGAGAGACCGACCCGCGCTTTCACGCCCGCTTCGACGCCCGCAGCAAGCTGTATCGCTATCGCTTCTACCTCAGCCGCGCGCGCAGTCCGCTGCTGGCCGACCGCGCCTATCAGGTGCCGCGCAAACTTGACCTGGAGGCCATGAGCGAAGCCGCGGCCTATCTGATCGGCACCCACGACTTCCTGAGCTTCCGCACCAAC
PROTEIN sequence
Length: 159
MRRILLEVEYHGQHFFGWQRQGPARSVQATLEAAIADLVGQAAEVHGAGRTDRGVHALAMPAHVDVDTRLRCDEIVMALNARLPGDCAVRTARETDPRFHARFDARSKLYRYRFYLSRARSPLLADRAYQVPRKLDLEAMSEAAAYLIGTHDFLSFRTN