ggKbase home page

anamox1_curated_scaffold_45_9

Organism: anamox1_Bacteroidetes_39_16_curated

near complete RP 53 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(7460..8005)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Pontibacter sp. BAB1700 RepID=J1FFV9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 254
  • Evalue 5.20e-65
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 254
  • Evalue 7.30e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 187.0
  • Bit_score: 248
  • Evalue 8.00e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pontibacter sp. BAB1700 → Pontibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 546
TTGGAACATCAGGCAGACAACGAACTTCTACAGCTTTTCAATAATGGCAGCAGCCATTATGCTTTTAATTTAATCATAAAAAAATATCAGCAGCGCGTTTATACCCATATCAGACGAATGGTGATTGACCATGACGATGCCAGCGATCTTACTCAAAATACTTTTATCAAAGTATGGCATAACCTGCCTAAGTTCAGAGAAGACTCACAACTGTTTACCTGGATATACCGAATAGCCACCAACGAGTGTTTGAATTTTCTTAAAAACAAACGCAAAAGATTTTTTCTTCCAATTGGTGATGTAGAGGGAGAACTCTCCGACAAACTGGCTCATGAACCCTCTCTAAAAGGCGATGCCATTGAAATGAAACTTCAAAAAGCACTGTTGCTGCTGCCTGAAAAGCAACGCCTGGTATTCAACATGCGCTACTATAATGAAATGAAATACGAAGAAATGAGCGAAGTGCTTGGCACCTCTGTGGGAGCGCTCAAAGCATCCTACCACCATGCCGTGCAGAAAATTGAAAATTATTTGACCTCCGATTAA
PROTEIN sequence
Length: 182
LEHQADNELLQLFNNGSSHYAFNLIIKKYQQRVYTHIRRMVIDHDDASDLTQNTFIKVWHNLPKFREDSQLFTWIYRIATNECLNFLKNKRKRFFLPIGDVEGELSDKLAHEPSLKGDAIEMKLQKALLLLPEKQRLVFNMRYYNEMKYEEMSEVLGTSVGALKASYHHAVQKIENYLTSD*