ggKbase home page

anamox1_curated_scaffold_1243_18

Organism: anamox1_Bacteroidetes_63_11_curated

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: 20345..20689

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFX6_FLELS similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 114.0
  • Bit_score: 155
  • Evalue 2.70e-35
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 155
  • Evalue 7.60e-36
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 155
  • Evalue 3.80e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pontibacter korlensis → Pontibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCACGCGCAAAGAACAAGGTCGCCAGCAAGACCCGCCGCAAAAAGATCATCGCCCAGGCCAAGGGCAACTTTGGCCGCCGCAAGAACGTGTACACCGTGGCCAAGAACACGGTGGAGAAGGGCTACGAACACGCCTACCGGGGCCGCAAGCTCAAGAAGCGCGACTTCCGCGCCCTGTGGATCCAGCGCATCAACGCCGCCACGCGCATGAACGGCATGTCCTACAGCGTGTTCATGAACAAGCTCAAGCAAGCCAACATCAACCTGGACCGGAAGGCCCTGGCCGAGATCGCCTTCAGCGATGCCGAGGCGTTCAAGGCCATTGTGGACAAGGTGAAGTAA
PROTEIN sequence
Length: 115
MPRAKNKVASKTRRKKIIAQAKGNFGRRKNVYTVAKNTVEKGYEHAYRGRKLKKRDFRALWIQRINAATRMNGMSYSVFMNKLKQANINLDRKALAEIAFSDAEAFKAIVDKVK*