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anamox1_curated_scaffold_4052_1

Organism: anamox1_Betaproteobacteria_69_7_curated

near complete RP 42 / 55 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1..195)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 66.0
  • Bit_score: 105
  • Evalue 2.00e-20
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 66.0
  • Bit_score: 100
  • Evalue 1.30e-19
DNA-directed RNA polymerase subunit alpha Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z262_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 66.0
  • Bit_score: 104
  • Evalue 2.40e-20

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Taxonomy

marine actinobacterium MedAcidi-G2B → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGCTCATCATCCAGCGCCCCGACATCGAGGCCGAGGAGCCCGAAGGCAACCTCCAGCGGTTCGTCATCGGGCCGCTCGAGCCCGGCTTCGGGCACACCCTGGGCAACAGCCTGCGCCGTGCGCTCCTCTCGTCTATCCCGGGGGCGGCCGTCACCCAGGTCCGCTTCGACGAGGCTCTCCACGAGTTCTCCACG
PROTEIN sequence
Length: 65
MLIIQRPDIEAEEPEGNLQRFVIGPLEPGFGHTLGNSLRRALLSSIPGAAVTQVRFDEALHEFST