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anamox1_curated_scaffold_409

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Displaying items 31-60 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_409_31
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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34499..35740
DNA (1242bp) protein (414aa)
tyrS; tyrosyl-tRNA synthetase TyrS (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tyrosyl-tRNA synthetase Tax=Ideonella sp. B508-1 RepID=UPI00034B6677
anamox1_curated_scaffold_409_32
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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35763..36653
DNA (891bp) protein (297aa)
Cation diffusion facilitator family transporter Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH84_9BURK
cation efflux family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_409_33
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36650..37090
DNA (441bp) protein (147aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH85_9BURK
anamox1_curated_scaffold_409_34
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37105..38373)
DNA (1269bp) protein (423aa)
Putative phenylacetate-CoA ligase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y343_LEPCP
putative phenylacetate-CoA ligase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_409_35
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38384..38680)
DNA (297bp) protein (99aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037C4B5B
Uncharacterized protein {ECO:0000313|EMBL:KGM40104.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
anamox1_curated_scaffold_409_36
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38677..39483)
DNA (807bp) protein (269aa)
Putative ABC transporter ATP-binding protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM76_RUBGI
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL94113.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_409_37
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(39515..40846)
DNA (1332bp) protein (444aa)
Putative ABC transporter, substrate-binding protein Tax=Variovorax paradoxus B4 RepID=T1XI72_VARPD
putative ABC transporter, substrate-binding protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
anamox1_curated_scaffold_409_38
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40909..41985)
DNA (1077bp) protein (359aa)
Putative branched-chain amino acid transport system permease Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM78_RUBGI
putative branched-chain amino acid transport system permease
Putative branched-chain amino acid transport system permease {ECO:0000313|EMBL:BAL94115.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_409_39
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(42014..42943)
DNA (930bp) protein (310aa)
Inner-membrane translocator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y338_LEPCP
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACB35694.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_409_40
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(42953..43738)
DNA (786bp) protein (262aa)
ABC transporter ATP-binding protein LivG Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM80_RUBGI
livG; ABC transporter ATP-binding protein LivG
ABC transporter ATP-binding protein LivG {ECO:0000313|EMBL:BAL94117.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_409_41
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43735..45684)
DNA (1950bp) protein (650aa)
AMP-dependent synthetase and ligase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUQ5_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGJ12073.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
AMP-dependent synthetase and ligase
anamox1_curated_scaffold_409_42
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45818..46660
DNA (843bp) protein (281aa)
Crp/FNR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUQ4_9BURK
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:EGJ12072.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
CarD family transcriptional regulator
anamox1_curated_scaffold_409_43
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46573..47877)
DNA (1305bp) protein (435aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hemL; glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRV6_9BURK
anamox1_curated_scaffold_409_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47867..48826)
DNA (960bp) protein (320aa)
phosphomethylpyrimidine kinase type-1 (EC:2.7.1.49 2.7.4.7)
Phosphomethylpyrimidine kinase type-1 {ECO:0000313|EMBL:BAL97549.1}; EC=2.7.1.49 {ECO:0000313|EMBL:BAL97549.1};; EC=2.7.4.7 {ECO:0000313|EMBL:BAL97549.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphomethylpyrimidine kinase type-1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX12_RUBGI
anamox1_curated_scaffold_409_45
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49028..49180
DNA (153bp) protein (51aa)
Rubredoxin Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUC6_9BURK
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
rubredoxin
anamox1_curated_scaffold_409_46
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49218..49616
DNA (399bp) protein (133aa)
Twitching motility, CheY-like protein PilG Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX10_RUBGI
pilG; twitching motility, CheY-like protein PilG
Twitching motility, CheY-like protein PilG {ECO:0000313|EMBL:BAL97547.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_409_47
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49663..50034
DNA (372bp) protein (124aa)
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRV2_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ11070.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilH; twitching motility protein PilH
anamox1_curated_scaffold_409_48
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50057..50587
DNA (531bp) protein (177aa)
Twitching motility signal transduction protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRV1_9BURK
Twitching motility signal transduction protein {ECO:0000313|EMBL:EGJ11069.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilI; twitching motility signal transduction protein PilI
anamox1_curated_scaffold_409_49
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50644..52947
DNA (2304bp) protein (768aa)
Methyl-accepting chemotaxis sensory transducer Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRV0_9BURK
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EGJ11068.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilJ; twitching motility protein PilJ
anamox1_curated_scaffold_409_50
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53003..59107
DNA (6105bp) protein (2035aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00036BFACB
pilL; twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ABM96139.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_409_51
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59232..60260
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003619C3B
Diguanylate cyclase {ECO:0000313|EMBL:EGJ08714.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
diguanylate cyclase
anamox1_curated_scaffold_409_52
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60325..60906
DNA (582bp) protein (194aa)
UPF0301 protein RGE_42030 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX02_RUBGI
hypothetical protein
UPF0301 protein RGE_42030 {ECO:0000256|HAMAP-Rule:MF_00758}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_409_53
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60899..61324
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative Holliday junction resolvase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX01_RUBGI
putative Holliday junction resolvase
anamox1_curated_scaffold_409_54
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61321..61821
DNA (501bp) protein (167aa)
pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase (EC:2.4.2.9)
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase {ECO:0000313|EMBL:BAL97537.1}; EC=2.4.2.9 {ECO:0000313|EMBL:BAL97537.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX00_RUBGI
anamox1_curated_scaffold_409_55
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61821..62783
DNA (963bp) protein (321aa)
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Aspartate carbamoyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ9_RUBGI
anamox1_curated_scaffold_409_56
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62780..64087
DNA (1308bp) protein (436aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK39_9BURK
Dihydroorotase {ECO:0000313|EMBL:EGJ08707.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_409_57
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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64118..65683
DNA (1566bp) protein (522aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Putative thymidine phosphorylase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6C6_LEPCP
thymidine phosphorylase
anamox1_curated_scaffold_409_58
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65680..66567
DNA (888bp) protein (296aa)
putative ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Putative ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:BAL97532.1}; EC=2.7.6.1 {ECO:0000313|EMBL:BAL97532.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative ribose-phosphate pyrophosphokinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ5_RUBGI
anamox1_curated_scaffold_409_59
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66583..67329)
DNA (747bp) protein (249aa)
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ4_RUBGI
anamox1_curated_scaffold_409_60
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67421..67837
DNA (417bp) protein (139aa)
Rhodanese domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ3_RUBGI
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:BAL97530.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 31-60 of 90 in total

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