ggKbase home page

anamox1_curated_scaffold_172_24

Organism: anamox1_Burkholderiales_71_17_curated

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 32800..33420

Top 3 Functional Annotations

Value Algorithm Source
rluA; ribosomal large subunit pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 212.0
  • Bit_score: 229
  • Evalue 7.50e-58
Pseudouridine synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNU2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 205.0
  • Bit_score: 258
  • Evalue 4.10e-66
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EHR72628.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 205.0
  • Bit_score: 258
  • Evalue 5.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCCTTCCTGATCCACCTCGACGCGGAGTTCGCACTCGTGAACAAGCCCACGGGCTTGCTCTCGGTGCCCGGGCGCGGCCCCGAGCGCGCGGAATGCGCCTGGACACGCGTGCAGCGGCTCGCTGCCGATGCCCTCGTCGTGCACCGGCTGGACATGGCGACGTCCGGGCTGCTGCTGTTCGCGCGCGGCGCCGTGCTGCAGCGAGCGCTGAGCATGGCGTTCGCGGCGCGTGCCGTCGACAAGCGCTACGAAGCCCTGGTGCACGGCGGTCCCGAGGCCGAGAGGGGAGAGATCGCGCTGCCGCTGGCCGCCGACTGGACGCAGCGGCCGCGCCAGAAGGTCGATGCCACGCACGGCAAGCCAAGCCTGACCCGCTGGCAGGTGCAGGCGCGCGAGGGCGGACGCACACGGCTGTCGCTGCAGCCGGTGACGGGGCGCTCGCATCAACTGCGCGTGCACCTCGCGGCGATGGGCTGGCCGATCGTCGGTGACGCGCTCTACGACGACGCCGATCGCGCCGCCACGGTGCCGCGACTGATGCTGCATGCGTGCGAACTGGCGCTTGCACACCCGCTGGACGGACGCCGGCTTCACTGGCGTGCGCCCGCGCCGTTCTGA
PROTEIN sequence
Length: 207
MAFLIHLDAEFALVNKPTGLLSVPGRGPERAECAWTRVQRLAADALVVHRLDMATSGLLLFARGAVLQRALSMAFAARAVDKRYEALVHGGPEAERGEIALPLAADWTQRPRQKVDATHGKPSLTRWQVQAREGGRTRLSLQPVTGRSHQLRVHLAAMGWPIVGDALYDDADRAATVPRLMLHACELALAHPLDGRRLHWRAPAPF*