ggKbase home page

anamox1_curated_scaffold_264_31

Organism: anamox1_Burkholderiales_71_17_curated

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 29604..30317

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPW8_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 237.0
  • Bit_score: 412
  • Evalue 1.50e-112
filA; RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 237.0
  • Bit_score: 412
  • Evalue 4.20e-113
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 237.0
  • Bit_score: 412
  • Evalue 2.10e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTACACCGCCAAGGGACAACTCGACGCCAGCTCGCTGCTGCGGCAGTACAGCCCGCTCGTGCGCCGGCTGGCGCACCAGATGATCGCCAAGCTCCCGGCCAACGTCGAGCTCGACGACCTGATCCAGGTCGGCATGATCGGCCTGTCGGACGCGCTCACGCGCTTCGACGCCGCGCAGGGCGTGCAGTTCGAGACCTTCGCCACCCAGCGCATCCGCGGCGCCATGCTCGACGAGCTGCGCGGCAGCGACTGGATGAGCCGCGGCGACCGCCGCCACCAGCGCTCGATCGAGAACGCCGTGCACCGCCTCGAGCAGCGCCTGGGACGTGCGCCCAGCGAGAGCGAGATCGCCGCGGAGATGGGGCTTGCGCTCAAGGACTACCAGGAGCTCCTGGGCAAGGTGCGCGGCACGCAGCTCATCTACCTCGAGGACATGGGCAGCGACGGCGGCGACGACGACTTCCTCGATCGCCATGTCGCCGACGAGGAGGCCGATCCGCTGGGGCGCGTCGAGGACCAGCGCATGCGGCGCGCCCTCGTCGACGCGATCAAGAACCTGCCCGAGCGCGAGCAACTGGTGATGAGCATGTACTACGAGCAGGACATGAACCTGAAGGAGATCGCGGCGGTGCTCGGCGTCACCGAGAGCCGCGTCTGCCAGTTGCACAGCCAGTCGATCGCCCGGCTGCGCGCGCGCTTGCGCGAGTGGTGA
PROTEIN sequence
Length: 238
MYTAKGQLDASSLLRQYSPLVRRLAHQMIAKLPANVELDDLIQVGMIGLSDALTRFDAAQGVQFETFATQRIRGAMLDELRGSDWMSRGDRRHQRSIENAVHRLEQRLGRAPSESEIAAEMGLALKDYQELLGKVRGTQLIYLEDMGSDGGDDDFLDRHVADEEADPLGRVEDQRMRRALVDAIKNLPEREQLVMSMYYEQDMNLKEIAAVLGVTESRVCQLHSQSIARLRARLREW*