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anamox1_curated_scaffold_1618_10

Organism: anamox1_Gemmatimonas_aurantiaca_57_6_curated

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(12975..13535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 182.0
  • Bit_score: 322
  • Evalue 1.60e-85
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 182.0
  • Bit_score: 322
  • Evalue 4.50e-86
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37569.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 182.0
  • Bit_score: 322
  • Evalue 2.20e-85

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGATTGAGCGCTCCGGGATTCCGGCGGCCCAGGACGAGCGCGCCCTGGTGCTCGCAGCACAGGCAGGCGACCATGCCGCCTTTGCGGGTCTCGTGCACCGTCACCAGCGCCGTGCTTACGCTGTCGCCCGTGCAATCGTCCTCTCACATGACGATGCTGAAGACGCTGTGCAGGAAGGTTTTCTTCACGCGTTTCGGGCTCTGGAGAGGTTTCGTCCGGAGCAGGCTTTCGGCGCATGGCTTCACAGAATCGTTGCAAACGCCGCGCTTGATATCGCGCGACGGCGCAAGGTGCGGGACGCTGACGAACTGCCGGAGACTCTCTCGTCGCCACACAAGGACCCTGCCGAGGCGGACGAGCTCCGCTCGCGTCTGGTTCTTGCACTCAACACGCTTGGAGAGCGTCAGCGCGCGGTGATCGTGTTGCATGACGTGGAGGGTTACAAGCATGCCGAGATCGGTTCGCTGCTGGGAATACCTGAAGGTACGGCACGATCCGACCTGCATCATGCGAGGGCTCATCTTCGGCGTCAGCTGGCCAATTTGCGGAGTCTGAGATGA
PROTEIN sequence
Length: 187
VIERSGIPAAQDERALVLAAQAGDHAAFAGLVHRHQRRAYAVARAIVLSHDDAEDAVQEGFLHAFRALERFRPEQAFGAWLHRIVANAALDIARRRKVRDADELPETLSSPHKDPAEADELRSRLVLALNTLGERQRAVIVLHDVEGYKHAEIGSLLGIPEGTARSDLHHARAHLRRQLANLRSLR*