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anamox1_curated_scaffold_5459_3

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(1329..1847)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily Tax=Glaciecola polaris LMG 21857 RepID=K7A642_9ALTE similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 133.0
  • Bit_score: 83
  • Evalue 2.00e-13
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:KGB51522.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 154.0
  • Bit_score: 94
  • Evalue 1.60e-16
RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 143.0
  • Bit_score: 77
  • Evalue 3.00e-12

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGATGTCCGGGAACGACATTACCAGACAGCAGCTGACCCACTGGTTCCGCACGTGGCTCGCGCCCATGCGACGGCACCTCGTGGTGCGGGGACGTTTGCCGCCCGCCGACGTGGATGATATCGCGCAGGAGGTTTTCCTGCGCCTGCTGCGCTTCGAGCGGACCGAACTCGTGACTCACCCCCAGGCCTACCTGTTCAAGATCGCGGCCAATGTGCTGGCGGAACGCTCGGCCCGCGCCAGCTGGCGACAACCCCACGCGTCAGAATGGCTGGCGCAGCTCACCGATGACCGTGATCCTGAACAGGAGTGTGCGCGCGAAGAGGAGCACTCCGAGATCCGGAATGCGGTCGCGGCGCTCCCCCCGCGTGCCCGGACCATTCTGCGCATGCATTACGAGGAGAACCTGACCTACGAGACCATTGCGCAGCGGCTGAACATCACGCGCCGGATCGTGAAGCGGGATCTGATCCGGGCGTACGCGGACCTGCGCGCGGCGATCCGGCTGGAAGACCGATGA
PROTEIN sequence
Length: 173
MMSGNDITRQQLTHWFRTWLAPMRRHLVVRGRLPPADVDDIAQEVFLRLLRFERTELVTHPQAYLFKIAANVLAERSARASWRQPHASEWLAQLTDDRDPEQECAREEEHSEIRNAVAALPPRARTILRMHYEENLTYETIAQRLNITRRIVKRDLIRAYADLRAAIRLEDR*