ggKbase home page

PLM3_127_b1_sep16_scaffold_41513_1

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2..430)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7 similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 131.0
  • Bit_score: 59
  • Evalue 1.90e-06
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 132.0
  • Bit_score: 84
  • Evalue 1.00e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGAAAGCCGGCCGACAATTCGTACCCGTCCTATTCGTGCTTTTGCTTTTGGGCTGGATAGCGTGCTCGGCGGCCGCTGAATCCAAAGTTATCAACATCGGCTGGACCGGCGGCTCCGCTTGGACCGCATTGCCGGATCGAGTTGCATCGGAGCGCGGCTTCTTCGAGAAAGAAGGGCTGCGGGTGCGCTACATTCAGTTCCAAGGAACGAACTTAATGCTCAGCGCGCTACTCGCGAATGAGCTCGATTATGTCACTATCCTGCCCTTCATCGCCGGCGCAGCGACGCGCGGCTTACCAGTGAAAATCGTCGCCGCTACAGCTAAGGTCAGTGGCTACGCGATTGTTTCACGGCCAGAGATCGATAACGTCAAAGCGCTTAAGGGTAAAAGAATTGCGATCAATACTTTCGGCAGCTCGGCCGACTTT
PROTEIN sequence
Length: 143
VKAGRQFVPVLFVLLLLGWIACSAAAESKVINIGWTGGSAWTALPDRVASERGFFEKEGLRVRYIQFQGTNLMLSALLANELDYVTILPFIAGAATRGLPVKIVAATAKVSGYAIVSRPEIDNVKALKGKRIAINTFGSSADF