ggKbase home page

PLM3_127_b1_sep16_scaffold_64161_5

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(3304..4011)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase bin=GWD2_Deltaproteobacteria_55_8 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 229.0
  • Bit_score: 329
  • Evalue 2.10e-87
galE9; UDP-glucose 4-epimerase similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 186.0
  • Bit_score: 118
  • Evalue 2.10e-24
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 229.0
  • Bit_score: 329
  • Evalue 3.00e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGCTAAAAAGGGGATTCTCGTCACCGGCGGTTCGGGTTTGGTCGGTGCCTATGCGGTCGGCATGTTACTCGAGCGCGGCGAGCGCCCGGTGGTATTCGACGTCGCCCTCAATGAACGGCTGCTCAATGCCGTCGGCGTCGATAGCGCCAAGGTTACCCTGATCCGCGGTGACATGATGGATTTGCCGGCAATCATCTCCGCCATTCGCGATAACGATTGCGATCGGATCATTCATCTTGCGGCGTTTTTGGGCGAAGAAGTCCAACGGCGCCCTTACAGCGGCGTACGGTTGAATTTCATGGGCACGGTGAACGTTTTCGAAGCGGCCCGTCTAGAGAACGTATCCCGGGTTATCTTTCCGAGCTCCGGCACGGTTTATCTGGGCTCTCTCGGCGAAGGATTGACCAAGATCGATGAAAGCATTGCGATGAATCCACCGTCGGTTTATGCCGCAACCAAAGCAAGCTGCGAGTTCATGGGGCGCGCATACGCCAAACGGTATGGCTTCGAATTTATTTGCCTTCGTTACACCGGCGGCCTTTACGGCCCTTCGCCGGCCGCGCTCAAAGCGACGCGTGAGATCGCCATTCAACAAATGATTCGGGCAGCCGTAAAAGGTGAGTCGGCGCAAATCGGCTGGCCCTACGGACCGGCGGAGATTCTTTACGGCAAAGACGCCGCCACATCGGCAACGGCGATACCGTGA
PROTEIN sequence
Length: 236
MAKKGILVTGGSGLVGAYAVGMLLERGERPVVFDVALNERLLNAVGVDSAKVTLIRGDMMDLPAIISAIRDNDCDRIIHLAAFLGEEVQRRPYSGVRLNFMGTVNVFEAARLENVSRVIFPSSGTVYLGSLGEGLTKIDESIAMNPPSVYAATKASCEFMGRAYAKRYGFEFICLRYTGGLYGPSPAALKATREIAIQQMIRAAVKGESAQIGWPYGPAEILYGKDAATSATAIP*