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PLM3_127_b1_sep16_scaffold_13994_4

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(1831..2781)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 314.0
  • Bit_score: 344
  • Evalue 6.60e-92
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 320.0
  • Bit_score: 270
  • Evalue 3.40e-70
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 311.0
  • Bit_score: 339
  • Evalue 5.10e-90

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGCCTCGGAGCCCGAGACGGCCGATGAGCTGGAGGACGGCGACGAGCCGCTCGAGGCCTTGCTGGACAAGGACCCCGCCGAGCTCGGCGAGAAGCCCGAGGCCCCCGAGGCGGGCGACCGCAGCCGCGAGCTGATCGCGCTCTACCTGCAGGAGATCTCCCGGGTCAAGCTGCTGACCCCGGAGGAGGAGCAGGACCTGGCCCGCCGCGTCCAGGCCGGCGACGCCGAGGCCCCGAAGCGGCTCGTCGAGGCCAACCTGCGGCTCGTGGTCCGGATCGCCCGCCGCTATCTCCACCGCGGGCTCTCCCTCCTCGACCTGATCGAGGAGGGCAATGTCGGGCTGCTGCACGCCGCGCGCAAGTTCCAGCCCGACCGCGGCACGCGCTTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCGGTGGTGCGCGCGCTCGCGAACCAGGCGCGGACGATCCGGCTGCCGGTCCACGTGGAGCTGCTCCTCTCGCAGTACATGAAGCAGCGCAACGTGCTCACCCAGAGGCTCGGCCGGCCGCCCACGCTCGAGGAGGTGGCCGCGGTGATGAACCGGCCGGTCGGCGAGCTAGAGCAGCTCGAGAGCCTCCGCCAGCAGCCGGTCTCGCTCGACAAGCCCACCGGCGAGGACGGGAAGGGGAACCTGGGCGAGACGGTGGCGGATCCGACCGCGGCGGCGGGCAGCGGGCTGGCCGCCATGCTCCGCGCCCGGGCCGATCTGGCCGGCGTGCTCCAGGACCTGCCCGACCGGGAGCGCACGGTGGTGACCCTGCGCTTCGGGCTGGGCGGCGAGGCGCCCCTGACGCTCGCGCGCATCGGCCAGCGCCTGGGGCTCACGCGCGAGCGCGTGCGCCAGATCGAGTCCACCGCGCTCCAGCACCTGCGGCGCCTGCTGGCCGCGCGCGACGTCGAGCCGTCGGATCTGCTATGA
PROTEIN sequence
Length: 317
MASEPETADELEDGDEPLEALLDKDPAELGEKPEAPEAGDRSRELIALYLQEISRVKLLTPEEEQDLARRVQAGDAEAPKRLVEANLRLVVRIARRYLHRGLSLLDLIEEGNVGLLHAARKFQPDRGTRFSTYATWWIRQAVVRALANQARTIRLPVHVELLLSQYMKQRNVLTQRLGRPPTLEEVAAVMNRPVGELEQLESLRQQPVSLDKPTGEDGKGNLGETVADPTAAAGSGLAAMLRARADLAGVLQDLPDRERTVVTLRFGLGGEAPLTLARIGQRLGLTRERVRQIESTALQHLRRLLAARDVEPSDLL*