ggKbase home page

PLM3_127_b1_sep16_scaffold_23581_3

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 1226..1867

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 202.0
  • Bit_score: 322
  • Evalue 1.80e-85
sigW5; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 196.0
  • Bit_score: 151
  • Evalue 1.60e-34
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 202.0
  • Bit_score: 322
  • Evalue 2.60e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGACGACGCTGCACGCACCGAACGGACATCAGAACACCGCGGGGGGCCCGAGGAAGGCGGATCGGGACGCCGAGCTGGTGGAACGCCTGCGCCGGCAGGATCCCGGCGCGCCGGAGGAGCTGATCGCCACCTACGGCGACCGGGTCTACCGGCTCGCCATCCGCATCACGAGCAATGAGCAGGATGCGGAGGAAGTGGTGCAGGACGCGCTCTGGACGGCCGCCCGTAAGATCGACACCTTCAAGGGCGAGTCCGCCTTTGGGAGCTGGGTCTACCGCATCACCGCCAATGCGGCCTACCAGAAGCTCCGCAGCCGGCATGGCCAGCGCAACGAGATTTCCTGGGACGCCCTGTCGCCCGGCTTCGACGAGCTCGGCCAGCACGCGGAGCCGCTCCGCGACTGGTCGGGGCGCACCGAGGAGCCGGCGCTCCAGACCGAGCTGCGCAAGCTGCTGACCACCGCCATCGACGATCTGCCCGGGGACTACCGGACCGCGTTCCTCCTGCACGACGTCGAGGGGCTCTCCAACCCGGAGATCGCCGAGGCGCTGCACATCAGCCTACCTGCCGTGAAGTCGCGCGTGCACCGCTCGCGGTTGTTCCTCCGCCAGCGGCTGGGCGACTACATGCGGACCGCCTGA
PROTEIN sequence
Length: 214
MTTLHAPNGHQNTAGGPRKADRDAELVERLRRQDPGAPEELIATYGDRVYRLAIRITSNEQDAEEVVQDALWTAARKIDTFKGESAFGSWVYRITANAAYQKLRSRHGQRNEISWDALSPGFDELGQHAEPLRDWSGRTEEPALQTELRKLLTTAIDDLPGDYRTAFLLHDVEGLSNPEIAEALHISLPAVKSRVHRSRLFLRQRLGDYMRTA*