ggKbase home page

PLM3_127_b1_sep16_scaffold_36630_4

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(2073..2477)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F bin=GWF2_Methylomirabilis_70_14 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 134.0
  • Bit_score: 181
  • Evalue 5.40e-43
yfdE; L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 133.0
  • Bit_score: 146
  • Evalue 5.40e-33
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 134.0
  • Bit_score: 181
  • Evalue 7.50e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 405
ACCAAGACCGGCACGATCATCGTCGCCGCGGGCAATGATCGCCTCTTCGCCAAGCTCGCGGGCGTCGTGGGCCACCCGGAGTGGGCCAAGGACGAGCGCTTTGTCACCAACGCCGCGCGGGTCGCCAACAAGTCCGCGTTGCTCGCCGAGCTCGACGCGATCTTCCTGACCCGCACCAAGGGCGAGTGGATCGACCTGCTGGAAGTGGGCGGCGTGCCCTGCGGGCCGATCCACACCCTGCCCGAGGCGGTCACGCAGCCGCAGGCCGAGGCCCTCGGCATCATCCAGCGCCTCCCCGGCGACGACTACGACGTCGTCTCCCTGCCGCTCTCCTTCGACGGCCAGCGCCCCCCAATCCGCCGCGCCCCCCCGCGCATCGGTGAGCACAACGCCGAGATCAAATAG
PROTEIN sequence
Length: 135
TKTGTIIVAAGNDRLFAKLAGVVGHPEWAKDERFVTNAARVANKSALLAELDAIFLTRTKGEWIDLLEVGGVPCGPIHTLPEAVTQPQAEALGIIQRLPGDDYDVVSLPLSFDGQRPPIRRAPPRIGEHNAEIK*