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PLM4_32_coex_redo_sep16_scaffold_1121_13

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(10429..12081)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 540.0
  • Bit_score: 740
  • Evalue 7.20e-211
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 541.0
  • Bit_score: 714
  • Evalue 1.20e-203
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 537.0
  • Bit_score: 758
  • Evalue 4.70e-216

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
GTGGCGGAAGAGATCGACAACCGCGAAGAACGACCGCTGCCGGCCCTGGAGGTCGAGCCGGTCGAGGAGATCCTCTCGGAGGAGCTCGCGGCCAAGCGGCTGGGCGACCGGGTCGGGATCGAGTACGTCGATCTCGCGAACTTCGAGATCGACCCCGAGCTGTTCCGATCGATCCCGGTAGACCTCATGTTCCGCTACAACTTCGTCCCGCGCGCGCGGATGGCGGGCGGGCTCCAGATCGTCGTGGCCGACCCGACGGACGTCCTGATGATCGACGAGCTCGAGCTCTTGCTCGGGACCTCGATCGAGGTCGTCGTCGGGACCTCGACGGCGATCCAGGAGATCCTCAAGAAATCCGAGTCGTCCCAGCGCGTCCTCGAGGAGGCGACCGAGGAGTTCCGCATCCAGGTGGTGCGCGAGGACGACGAGACCGGCGAAGAGACCCTCACGATCGACCGGCTGACCTCCGACCAGTCGCCGATCATCAAGCTCGTCGACTCGACCCTCTTCAACGCGCTCCAGCGCCGGGCCTCGGACATCCACATCGAGACCCGGGACCGCGAGGTCGTCATCAAGTACCGGATCGACGGCGTGCTGTATCAGGCGATGGAGCCGATCGACCGCAAGTTCCACCAAACGATCATCTCCCGCATCAAGGTCATGTCCGAGCTCGACATCTCCGAGAAGCGCGTCCCCCAGGACGGCCGCTTCAAGCTCCGGATCAAGGGGCGCACGGTCGACTTCCGCGTCTCGATCATGCCGTCGGTCCACGGCGAGGACTGCGTCATCCGCATCCTCGACAAGGAGTCGACGAACCGCGAGTTCGCCTCGCTCTCCCTCGACGTCTGCGGCTTCGAGGAGCGCGAGGTCGTCCGGATGCGCCGCTTCATCAAGGAGCCGTACGGCATGGTCCTCGTCACGGGCCCCACGGGCTCCGGCAAGACGACGACGCTGTACGCCGCGATCTCGGAGATCAAGAACGACGAGGACAAGATCATCACGATCGAGGACCCGGTCGAGTACCAGCTTCCGGGGATCACCCAGATCCCGGTCAACGAGAAGAAGGGGCTCACGTTCGCGCGCGGCCTACGCTCGATCCTCCGCCACGACCCGGACAAGATCATGGTCGGCGAGATCCGCGACGCCGAGACCGCGCAGATCGCGATCCAATCGGCCCTGACCGGCCACCTCGTCTTCACGACCGTCCACGCCAACAACGTCGTCGACGTGCTCGGCCGCTTCCTCAACATGGGCGTCGAGCCCTACAACTTCGTCTCGGCGCTGAACTGCATCCTCGCGCAGCGCCTGGTCCGGCTCATCTGCGCCTCGTGCAAGCGGCCGGTCAAGGCGACGAAGGAGCAGCTCGTCGCCTCCTCCCTCGATCCCGCCCGGTACCAGGGGTACACGTTCTTCGAGGGGAAGGGGTGCATCGACTGCAACGGGACCGGCTACACCGGCCGCACCGCGATCGCCGAGCTCCTCGACATGTCCGACCGCATCCGCGAGATGATCCTCGAGAAGAGGCCCGCCGCGGACATCAAGCGGGCCGCCAAGGAGGAGGGGATGACCTTCCTCCGCGAGGCCGCGCTCGCCAAGGTGTTCGCCGGCAAGACGACCCTCCACGAGATCAACAAGGTGACCTTCGTCGAATGA
PROTEIN sequence
Length: 551
VAEEIDNREERPLPALEVEPVEEILSEELAAKRLGDRVGIEYVDLANFEIDPELFRSIPVDLMFRYNFVPRARMAGGLQIVVADPTDVLMIDELELLLGTSIEVVVGTSTAIQEILKKSESSQRVLEEATEEFRIQVVREDDETGEETLTIDRLTSDQSPIIKLVDSTLFNALQRRASDIHIETRDREVVIKYRIDGVLYQAMEPIDRKFHQTIISRIKVMSELDISEKRVPQDGRFKLRIKGRTVDFRVSIMPSVHGEDCVIRILDKESTNREFASLSLDVCGFEEREVVRMRRFIKEPYGMVLVTGPTGSGKTTTLYAAISEIKNDEDKIITIEDPVEYQLPGITQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDAETAQIAIQSALTGHLVFTTVHANNVVDVLGRFLNMGVEPYNFVSALNCILAQRLVRLICASCKRPVKATKEQLVASSLDPARYQGYTFFEGKGCIDCNGTGYTGRTAIAELLDMSDRIREMILEKRPAADIKRAAKEEGMTFLREAALAKVFAGKTTLHEINKVTFVE*