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PLM4_32_coex_redo_sep16_scaffold_687_4

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: 2147..2881

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 237.0
  • Bit_score: 260
  • Evalue 3.60e-67
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:ACI20189.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 237.0
  • Bit_score: 260
  • Evalue 1.80e-66
Pseudouridine synthase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJH7_THEYD similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 237.0
  • Bit_score: 260
  • Evalue 1.30e-66

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Taxonomy

Thermodesulfovibrio yellowstonii → Thermodesulfovibrio → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 735
ATGAGCGAGCGCCTCCAGAAGATCTTGGCCCACGCCGGTATCGCCTCCCGGCGGGCCGCCGAGCGGCTCATCGTCGCCGGCCGCGTGACCGTCAACGGGACCGTCGTCTCCGAGCTCGGCACCAAAGTCGACCCCGACCGGGACGCGATCAAGGTCGACGGGAAACGCCTCCACGCGCCTCCGGCTCGGCCGACGTATCTGGCCTTCCACAAGCCCCGGGGGGTCGTGACGACGATGAGCGATCCCGAAGGCCGTCCCACGGTGCGCGACTTCCTGGGAGGGGTCCGCGTCCGCGTCTATCCGGTGGGGCGGCTGGATTTCGACAGCGAGGGGCTCTTGCTCCTGACCGACGACGGCGCGCTCGCCCGGGACCTCATGCACCCGTCGTCCGGTGTCGAGAAGACCTACCGCGCGAAGGTGAGGGGCTTTCCGGATCCGCCCACGCTCGACCGCCTGAGCCGTGGGATCCACCTCGACGGGCGCCGCACGGGTCGGGCCGAGGTCCGCGTCGTGAAGGCCGGGGACAACCCCTGGATCGAGATCGGGATCACCGAGGGGCGGAACCGCCAGGTCCGCCGGATGCTCCAGGTCGTGGGGCACCCTGTGCAGCGGCTGCGGCGGATCCGCTACGGGGGGGTCGACCTCGGACGGCTGCCCCCCGGCGGTCTCCGGCCGCTGCGTCCCGCGGAAGTCGAGCGGTTGAGACGCGCCGTGAGGACGAGGCGGTCGTCGTAA
PROTEIN sequence
Length: 245
MSERLQKILAHAGIASRRAAERLIVAGRVTVNGTVVSELGTKVDPDRDAIKVDGKRLHAPPARPTYLAFHKPRGVVTTMSDPEGRPTVRDFLGGVRVRVYPVGRLDFDSEGLLLLTDDGALARDLMHPSSGVEKTYRAKVRGFPDPPTLDRLSRGIHLDGRRTGRAEVRVVKAGDNPWIEIGITEGRNRQVRRMLQVVGHPVQRLRRIRYGGVDLGRLPPGGLRPLRPAEVERLRRAVRTRRSS*