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PLM4_32_coex_redo_sep16_scaffold_178622_1

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..373

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter efflux protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 123.0
  • Bit_score: 191
  • Evalue 2.80e-46
ABC transporter efflux protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 123.0
  • Bit_score: 154
  • Evalue 1.10e-35
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 123.0
  • Bit_score: 174
  • Evalue 5.00e-41

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GTTGGGCTGCTCGTGACGGGGATTTCCCTGTTCGTCGGCGCCGTGGGCGTCATGAACATCATGTTCGTGTCCGTCACCGAGCGAACGCGGGAGATCGGAATCCGGAAGGCGATCGGCGCGAAGCGACGGAGCATTCTCTTCCAGTTTCTATTCGAGTCCTCCTCCATTTGTCTGCTCGGCGGGACGATCGGCATCGTAATCGCGGCGGGATTGACCGCCGTGATCAACAAGATGCTCATGCCCGCGAGCATCTCGCTCCCGATTCTCTTCGCCGCGGTCCTGATTTCGATCGCCGTGGGCGTGCTGGCCGGCGTTGTCCCCGCGTATCGCGGCGCGAGTCTCGACCCGATCGAGGCGCTGCGCTATGAGTAG
PROTEIN sequence
Length: 124
VGLLVTGISLFVGAVGVMNIMFVSVTERTREIGIRKAIGAKRRSILFQFLFESSSICLLGGTIGIVIAAGLTAVINKMLMPASISLPILFAAVLISIAVGVLAGVVPAYRGASLDPIEALRYE*