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PLM4_32_coex_redo_sep16_scaffold_252821_2

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(329..1150)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor Tax=Arenimonas oryziterrae RepID=UPI0003B57818 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 273.0
  • Bit_score: 439
  • Evalue 1.30e-120
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 275.0
  • Bit_score: 333
  • Evalue 3.70e-89
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 273.0
  • Bit_score: 489
  • Evalue 2.00e-135

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
CTGGGCCTGCTCGATGCCGACACTCCCGCGCTGGCGTTGGCCCGCGACATCGTCGCCAACCATCTCGACTCCCTGGCCCGTAACGGCGCGGCCAAGCTGGCCACGCAGCTGCGGCAACCGGCGGAGGCGGTGGAGCAGGCGGTGGCGCTGCTGCGTTCGCTCGATCCCAAGCCGGGTGCGCGGATCGGGGGCAGCGAGCCGCAGTTCATCGTCCCCGACGCGATCGCCTACCGGCAGGGCGGGGTCTGGAAAGTCGCCACCAACGCGGGCAGCCAGCCCCGGATCGGCATCAACCGGCATTACGAGCGCCTGATCGGCAAGTCCACCCGGGAGGACGACAGCTACCTTCGGGCGCAATTGCAGGAGGCGCGCTGGCTGATCAAGAGCCTTGAGACGCGCGCCGACACCCTGCTGCGCGTGGCGCGCTCAATCGTGCGCCAGCAGAGCGGATTCCTCGAGCACGGCCCGCAGGCGATGCGGCCGCTGACCCTGCGCGAAGTCGCCGAGGAACTGGGCCTGCACGAATCCACGATCTCGCGAGCGACCACCCGCAAGTACCTGCGCACGCCGCGCGGAACCTTCGAGTTCAAGTACTTCTTCAGCTCCGGGATAGCTACCGACAGCGGCGGCGGCGCCTCCGCCACCGCGATCCAGGCCATGCTCCGCGGCCTGATCGAAAAGGAGAACCCGCGTTCCCCGCTTTCCGACGCAAAACTCGCACAATTGCTGAAAACCGACGGCATTCCCGTCGCCCGGAGAACTGTGGCAAAGTACCGGGAAGCGATGAATATCCCCTCATCCACCGAGCGGCAGCGACTCTAG
PROTEIN sequence
Length: 274
LGLLDADTPALALARDIVANHLDSLARNGAAKLATQLRQPAEAVEQAVALLRSLDPKPGARIGGSEPQFIVPDAIAYRQGGVWKVATNAGSQPRIGINRHYERLIGKSTREDDSYLRAQLQEARWLIKSLETRADTLLRVARSIVRQQSGFLEHGPQAMRPLTLREVAEELGLHESTISRATTRKYLRTPRGTFEFKYFFSSGIATDSGGGASATAIQAMLRGLIEKENPRSPLSDAKLAQLLKTDGIPVARRTVAKYREAMNIPSSTERQRL*