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PLM4_32_coex_redo_sep16_scaffold_4395_6

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(6057..6791)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 244.0
  • Bit_score: 415
  • Evalue 6.70e-114
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 244.0
  • Bit_score: 415
  • Evalue 3.30e-113
tRNA pseudouridine synthase A Tax=Geobacter uraniireducens (strain Rf4) RepID=TRUA_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 244.0
  • Bit_score: 415
  • Evalue 2.40e-113

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCGAAATATCAAACTTATCGTCGAATACGACGGCACCAATTATTCCGGCTGGCAGATCCAGCCCAATGGCCTTGCCATCCAGCAGGTGCTGGAAGAGGCCTTGGCCACCATGCTTGGTGAGTTCGTCCGGGTCTACTCGTCCGGCCGCACCGATGCCGGTGTCCATGCGCTGGGCATGGTGGCTGCGTTCAGGACCGAGAAGCAGCTGCCGCTGCGTGCCTTTTCCGACGGACTCAACTCGCTCTTGCCGAACGATATCGCCATCAAGGATGCCGTTGAGGCGCCGCTTGCGTTCAATCCCCGCGCCGATGCAAAGAGCAAGCATTACCGCTATACGATATATAATGGCGGTCGCCGCTCCCCATTGGCGCGTCACCGTTCCTGGCATCTGCGCGGGGCACTTGATCTGGAGCGTATGCAGGCAGCGGCTGCCCATTTCATCGGCGAGCATGACTTTGCTGCTTTCCGCGCCGCCAACTGCGCCGCCAAAACTACGGTGCGCCGTCTTTTCAGCGTGTCCGTTGTCAGGGACGGAGAATCCGTAATTGTTGATGTGCACGGTTCGGGATTTTTAAAAAATATGGTCAGGATCATCGCCGGCACTCTCGCAGCGGTCGGGCAGGGGAAAATCAACCCGGCTGTTGTTCCGGAATTGTTCGCTTCCGGCGACAGGGCGTCCGCAGGGAGTACGGCACCCCCCCAGGGGCTCTGCCTCATGGAAGTTTTTTATTGA
PROTEIN sequence
Length: 245
MRNIKLIVEYDGTNYSGWQIQPNGLAIQQVLEEALATMLGEFVRVYSSGRTDAGVHALGMVAAFRTEKQLPLRAFSDGLNSLLPNDIAIKDAVEAPLAFNPRADAKSKHYRYTIYNGGRRSPLARHRSWHLRGALDLERMQAAAAHFIGEHDFAAFRAANCAAKTTVRRLFSVSVVRDGESVIVDVHGSGFLKNMVRIIAGTLAAVGQGKINPAVVPELFASGDRASAGSTAPPQGLCLMEVFY*