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PLM4_32_coex_redo_sep16_scaffold_44768_2

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 902..1816

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 304.0
  • Bit_score: 411
  • Evalue 6.00e-112
tRNA pseudouridine synthase B Tax=Geobacter uraniireducens (strain Rf4) RepID=TRUB_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 304.0
  • Bit_score: 411
  • Evalue 4.30e-112
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 304.0
  • Bit_score: 411
  • Evalue 1.20e-112

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGACGGTTTTATAGTTATTGACAAGCCGGCCGGGATGACCTCACATGATGTGGTAAGCGCTGTTCGCAGGATTACCGGTCAGAAAAAGGTCGGCCATACCGGTACCCTTGACCCCTTTGCAACCGGTGTATTGCCGGTCGCCCTTGGAGAGGGGACCAAAGCCATACCTTTCCTCGATGAATCGATAAAGGAATACCGGGCGGTGATGGTGCTCGGAGTTGCCACGGATACCCAGGACTGTACGGGATCAGTTGTGCACGAAGGTGACTGGAGCCATGTTACACCACGTGCACTGGAGGATCTCTGCCGTTCGTTTACCGGCACTTCGACTCAGATTCCACCCATGTTCTCCGCTTTGAAACGAAACGGCGTGCCGCTCTACAAACTTGCCCGCCAAGGTATCGAAGTGTTGCGCGAACCAAGGGCGATCGAGATATTTTCCCTGGTCCTTGATGACGTCAGACTTCCTGAAGCGGCTTTTACCGTCAGCTGCTCCCGCGGCACTTACGTCAGGACACTGGCAAAGGATATGGGAGAAATGCTCGGCTCCGGAGCCCATCTGCTGCAACTGCGCAGAACCAGGAGTGGCCCTTTTTGCATCGGTAACGCAATTACCCTGGAGAGATGGGCCCAATGCGTTGAGGAGCGCCGGACAGAGGACGTCCTCATTTCGCCTTATGCAGCGCTTGCTCAGCTGAGGGATTTTCCCCTGACGGCTAAAGGAGCTGCAATGGTGGCCCATGGGATTTTCCCGGACCAGGATGTTTTCCAGGAGACTTCAGGCTGCGTGCATCAGTCGGGAGAGATAGTGAGGCTTTCCGTCGGCGGCACTCTTCTCGGCGTGGCAGAAATCAGCACCCCACTGGAAGGCGTAAGACCAAAAAACTCCAGGCTTTTAAGGGTGTTCAACTAG
PROTEIN sequence
Length: 305
MDGFIVIDKPAGMTSHDVVSAVRRITGQKKVGHTGTLDPFATGVLPVALGEGTKAIPFLDESIKEYRAVMVLGVATDTQDCTGSVVHEGDWSHVTPRALEDLCRSFTGTSTQIPPMFSALKRNGVPLYKLARQGIEVLREPRAIEIFSLVLDDVRLPEAAFTVSCSRGTYVRTLAKDMGEMLGSGAHLLQLRRTRSGPFCIGNAITLERWAQCVEERRTEDVLISPYAALAQLRDFPLTAKGAAMVAHGIFPDQDVFQETSGCVHQSGEIVRLSVGGTLLGVAEISTPLEGVRPKNSRLLRVFN*