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PLM4_32_coex_redo_sep16_scaffold_97498_2

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(379..1194)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 271.0
  • Bit_score: 384
  • Evalue 1.80e-104
Formamidopyrimidine-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000255|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103}; Short=AP lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_00103};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 271.0
  • Bit_score: 384
  • Evalue 9.10e-104
Formamidopyrimidine-DNA glycosylase Tax=Geobacter uraniireducens (strain Rf4) RepID=FPG_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 271.0
  • Bit_score: 384
  • Evalue 6.50e-104

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCCGGAACTGCCGGAAGTTGAAATCGCCCGCCGGGGCATTGCGCCGCATCTGGTCGGGAAAAGGATCTGCCGGGTTGTGTCACGCACCGAAAAGCTTCGACTGCCGATCCCTCCGGGACTGGATTCCCGGCTCTCCGGCCAGTTTATTCTTGCGCTGGAGCGACGCGGCAAATACCTCCTCGTTCGCTGCAGCGCCGGCACCCTTATCCTCCACCTGGGGATGTCCGGCAATCTGCGCCTGGTAACGGCTGCATTGCCTGCCGGCAAAAACGACCGACTCGACCTGGTGCTCGACAGCGGCCTTTCCCTGCGCTTCATCGATCCCCGCCGCTTCGGCACCGTCGTCTGGACCGAGGATGATCCGCTCAGCCACCCCCTTTTGGCTGCGCACGGCCCGGAACCTCTCGGAGATAACTTCTCCGGCGAGTATCTCTTCGGGAAAAGCCGGGGTCGCACTAGAGCAATCAAGCAGTTGATCATGGACAGCAAAATACTGGCGGGGGTTGGGAACATCTACGCAAACGAGGCGCTGTTCCACGCTGCCATCCAGCCGGGGACAGCGGCAGGCACACTATCAGAGACTCAGTGTCAGCGCCTGTCAGACGCGATCAAGGAAGTGCTGACAGACGCCATCGCCTGCGGCGGCAGCACCCTCCGCGATTTCCTCAGTTATGAAGGGAAAGCCAGCTACTTCCCCATGAAGTTTGCTGTCTACAGCCGTAGCGGCTCCCCCTGTCCCATCTGCAGCGCTCCCATCCAGCAGAGCCGCCTGGGTGGAAGGTCCACATATTTCTGCAGCAACTGTCAGCGCTGA
PROTEIN sequence
Length: 272
MPELPEVEIARRGIAPHLVGKRICRVVSRTEKLRLPIPPGLDSRLSGQFILALERRGKYLLVRCSAGTLILHLGMSGNLRLVTAALPAGKNDRLDLVLDSGLSLRFIDPRRFGTVVWTEDDPLSHPLLAAHGPEPLGDNFSGEYLFGKSRGRTRAIKQLIMDSKILAGVGNIYANEALFHAAIQPGTAAGTLSETQCQRLSDAIKEVLTDAIACGGSTLRDFLSYEGKASYFPMKFAVYSRSGSPCPICSAPIQQSRLGGRSTYFCSNCQR*