ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_245333_2

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(637..1170)

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent DNA ligase bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 174.0
  • Bit_score: 245
  • Evalue 2.30e-62
ATP dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 168.0
  • Bit_score: 237
  • Evalue 2.40e-60
Tax=GWB2_Geobacteraceae_52_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 174.0
  • Bit_score: 245
  • Evalue 3.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Geobacteraceae_52_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
CGGATACGGTTCAGCGATCACGTGGCCAAAGAGGGTGTCCTGTTCTACCGGGTCGCCAGGGAAAAGGGGCTGGAAGGGATCATCGCGAAACAGGGCCAGAGCATCTACGAGGCAGGCAGGAGGAGCGGGCAGTGGCTGAAGGTGAAGACGCGGCTCACGCAGGAGGGGGTGATCGCGGGCTTCACGGAGCCGGGAGGAGGCAGAAAACATTTCGGCGCCCTTGTGCTGGGCGCATACGAAGGCGACGCGTTGGTCCCCATCGGTCTGGTGGGAAGCGGATTCACCGCAAAAGAGTTAAAGGACCTCCGCGCACTAATGGAGCCTCTGATCCGGAACGAAAGCCCCTTGAGCAGGAAGCCCGAGACCAATGCGACCGTCACCTGGGTAAGGCCGGAGCTGGTCTGCGAGGTCAGTTTGTCCGAGTGGACCGAAGAGGGTTCCATGCGGCATCCGGTGTTCCTGCGAATGCGCGAGGATAAGGATGCCGGAGAAGTGGTGCGGGAGATATCGCAAAAGAAAGAGACGCACGAATAA
PROTEIN sequence
Length: 178
RIRFSDHVAKEGVLFYRVAREKGLEGIIAKQGQSIYEAGRRSGQWLKVKTRLTQEGVIAGFTEPGGGRKHFGALVLGAYEGDALVPIGLVGSGFTAKELKDLRALMEPLIRNESPLSRKPETNATVTWVRPELVCEVSLSEWTEEGSMRHPVFLRMREDKDAGEVVREISQKKETHE*