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PLM4_32_coex_redo_sep16_scaffold_308905_1

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(93..1037)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00036FCCFD similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 312.0
  • Bit_score: 326
  • Evalue 1.90e-86
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 314.0
  • Bit_score: 324
  • Evalue 2.00e-86
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ24740.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 314.0
  • Bit_score: 324
  • Evalue 9.90e-86

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
TATGTCTCGCTGATCTCCAACGTGATCATCGCGGCGATCGATCAAGCCTCGCTCAGGGGCCAGATTGCAGCGACCCAGGACATCATCAATGCGCAGTCCCAGCAGCTCGATCTCCTGAACCAGCAATTCGAGCTGGGCGCCGTCGCGCGAGGCGATGTGCTGCAGCAGCAAGCGCAATTGGCTCAGACTCAGGCGACCCTACCGCCGCTGCAAAGGGAGGTGGAGCAGACGCGCAACCAGCTCGCGCTTCTGCTTGGACGCTTTCCGTCCGAAGGCCAGATTCCGACCATCGAGCTGACCGACCTGATCCTGCCCCAACAATTGCCGATCAGCGTGCCGTCAAGGCTCGTCGAACAGCGGCCCGATGTGCGCGCTTCCGAGGCCACCTTGCATCAGGCGAGCGCGCTCGTCGGCGTCGCGGAAGCGGATCTGCTGCCGCAGTTCACGTTGTCCGCCAGTTTGAGCAGCAGCGCCGGTGTTTTCACCGAGTTCCTGACCTTGCAGAACACGGCGCTGCAGCTTGCCGCGGGCGTGACCCAGCCGATCTTCAACGGGGGCACGCTCCGGGCGCGGCAACGGGCCGCCGTCGCCCAATTCGACCGGGCGGGCGCACTCTACCGCAGCACGGTGCTGAACGCCTTCACCAACGTCGCCAATGTGCTGTCCGCGCTTCAGCGCGACGCGGAAACGCTTCAGGTGCAGCTCTATGCCGAGCAGACGGCGGGACAGAGCCTCGAGATCACGACCGAGCGTTTCCAGGCCGGCGCCATTGCGTATCTGTCGCTCCTCGATGCGCAACGCACCTATCAGCAGGCCCGCATCCTCCTGGTGAGGGCCCAGGCCAACCGCTATTCCGACACGGTGGCGTTGTTCACGGCGCTCGGCGGGGGATGGTGGAACCGTCAGGATGTCGCTGAGGACTACGCGACAACGCCGCCGCCATGA
PROTEIN sequence
Length: 315
YVSLISNVIIAAIDQASLRGQIAATQDIINAQSQQLDLLNQQFELGAVARGDVLQQQAQLAQTQATLPPLQREVEQTRNQLALLLGRFPSEGQIPTIELTDLILPQQLPISVPSRLVEQRPDVRASEATLHQASALVGVAEADLLPQFTLSASLSSSAGVFTEFLTLQNTALQLAAGVTQPIFNGGTLRARQRAAVAQFDRAGALYRSTVLNAFTNVANVLSALQRDAETLQVQLYAEQTAGQSLEITTERFQAGAIAYLSLLDAQRTYQQARILLVRAQANRYSDTVALFTALGGGWWNRQDVAEDYATTPPP*