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PLM3_127_b2_sep16_scaffold_807

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Displaying items 31-42 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_807_31
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27858..28340)
DNA (483bp) protein (161aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
ribonuclease H Tax=Dehalobacter sp. E1 RepID=UPI0002EF8831
ribonuclease H
PLM3_127_b2_sep16_scaffold_807_32
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(28724..29431)
DNA (708bp) protein (236aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_807_trna_2
unknown

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comp(29457..29528)
DNA (72bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_807_33
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(29544..31388)
DNA (1845bp) protein (615aa)
RNA polymerase sigma factor RpoD bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpoD; RNA polymerase sigma factor RpoD
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_807_34
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(31381..33255)
DNA (1875bp) protein (625aa)
DNA primase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_807_35
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(33261..35627)
DNA (2367bp) protein (789aa)
MutS2 protein bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
MutS2 protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_807_36
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(35680..35874)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S21
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_807_37
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(36011..36541)
DNA (531bp) protein (177aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_807_38
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(36572..37252)
DNA (681bp) protein (227aa)
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rplY; 50S ribosomal protein L25
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_807_39
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(37357..38295)
DNA (939bp) protein (313aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_807_trna_1
unknown

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comp(38330..38401)
DNA (72bp)
transferRNA Gln
PLM3_127_b2_sep16_scaffold_807_40
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(38414..38914)
DNA (501bp) protein (167aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 31-42 of 42 in total

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