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PLM3_127_b2_sep16_scaffold_415_17

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: comp(12164..13084)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 308.0
  • Bit_score: 336
  • Evalue 1.70e-89
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 293.0
  • Bit_score: 270
  • Evalue 3.30e-70
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 307.0
  • Bit_score: 427
  • Evalue 8.10e-117

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGAGTGAGGGGCCGGACGACGAGGCCATCCCCGACGAGCCTCTCGCGCCGCTCGTCGACGCCTCCGATCAGGATGTCCGCGCGGAGACCCGGGACACGAGCCGCGCCAACCTGGGCCTGTACTTCTCGGAGATTTCGCGCGTCGGTCTCCTCACCCGCGAGGAAGAGGTCGACCTCGCGCGGCGCGTGCAGGCCGGTGACGAGCGAGCCAAGGCCCGCCTCACCGAGGCCAACCTCCGCCTGGTCGTCCAGATCGCTCGCCGCTACCTGAACCGCGGCCTGCCCCTGCCCGATCTCATCGAGGAGGGGAATCTCGGCCTCATGCGCGCGGTGGAGAAGTTCGACCCGGAGCGCGGCACCCGCTTCTCGACGTACGCCACGTGGTGGATCCGTCACGCCATTGTGCGGGCGTTGGCCAACCAGGCCCGCATGATTCGCCTGCCCGTCCACGTCGAGTCGCTCCTCGGGCGCTACGCTCGGGAGCACGCCCGACTCACCCAGGAACTGGGCCGGGCGCCGACCTCGGATGAGATCGCGGCGTCGATGCACACCAGCGTGGAGCAAGTGAGAGAGCTGGAGGAGATCCGCCAGCCTCCGGTGTCCTTGGACGCGCCCGTGGGAGACGACGAAGCCAGACTGCTGGACTCCGTCGCCGACAGAGAAGCGGATCCGAGCGCCGCGCTCGGGACCCTGCTTCGGGCGCGGAGCGATCTCCTGTCCATGCTCGACGACCTGGCCGCCAACGAGGGCGCGGTCCTCCGGCGGCGCTTTGGCCTCGACGGAGAGCCGCCGGAGACGCTGGAGGCCATCGGCCGGCGCATGTCGCTCAGCCGCGAGCGCGTCCGCCAGATCGAGGCCAACGCGCTCCGCAAGCTGCGCGCCCTGCTCATGACCCGCGGGATCGACGCCGATCTGGTCTGA
PROTEIN sequence
Length: 307
MSEGPDDEAIPDEPLAPLVDASDQDVRAETRDTSRANLGLYFSEISRVGLLTREEEVDLARRVQAGDERAKARLTEANLRLVVQIARRYLNRGLPLPDLIEEGNLGLMRAVEKFDPERGTRFSTYATWWIRHAIVRALANQARMIRLPVHVESLLGRYAREHARLTQELGRAPTSDEIAASMHTSVEQVRELEEIRQPPVSLDAPVGDDEARLLDSVADREADPSAALGTLLRARSDLLSMLDDLAANEGAVLRRRFGLDGEPPETLEAIGRRMSLSRERVRQIEANALRKLRALLMTRGIDADLV*