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PLM3_127_b2_sep16_scaffold_1419_5

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 2571..3212

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 186.0
  • Bit_score: 261
  • Evalue 5.00e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 189.0
  • Bit_score: 118
  • Evalue 1.50e-24
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 186.0
  • Bit_score: 262
  • Evalue 3.10e-67

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Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGTCGAGGCCGTCAGCTTGCGTCACGCCGACGCGGTCTGGGACGATGGGCGGACGAGGGACAGCTCGCGGGTGGAGACGAGCGATGAGGCGTTGTGTCGGCGCGTGGCCCAGCGTGATCGGGAGGCGTTCGAGACGCTGGTCGAGCGCTACCGGCAGCGCGCCTACCGCCTGGCCTGGTCCATCCTCCGCGACGCCGAGGAGGCGCGGGACCTGTCGCAGGAGGTCTTCATCCGTCTCTACGAGGTCGCGGGGAGCTTCCGGGGCACGGCGCGCTTCTCGACGTGGTTTTACCGCATCCTGGTGAACCTGTGCCTGGACGCGCGCCGTCGCCGCCGCTGGTGGCATCTGACGGCGGCGCCGGTTGAGCGTGAGGACGGCACCTTCGAGTCCGTCGTGGAGCAGCAGCCGGCGCCCGGCGTCGACCCCGTTGCCGGGCTCGCGCGCGAGCAGCTGGCGAGGCAACTCTGGAAGGCCGTGGAGACACTCTCGCCGCAACAGCGGGCGGCCCTGATCCTTCAAGTTCAGGAGGAGTTGCCCACGCCGGAGATCGCGGCGGTGATGAAGTGCTCGGAGGCCACGGTGCGTGTCCACCTGCACCGCGCGCTGCAGGCGCTCAGGAAGACGATGAGGAAGGACTGA
PROTEIN sequence
Length: 214
MVEAVSLRHADAVWDDGRTRDSSRVETSDEALCRRVAQRDREAFETLVERYRQRAYRLAWSILRDAEEARDLSQEVFIRLYEVAGSFRGTARFSTWFYRILVNLCLDARRRRRWWHLTAAPVEREDGTFESVVEQQPAPGVDPVAGLAREQLARQLWKAVETLSPQQRAALILQVQEELPTPEIAAVMKCSEATVRVHLHRALQALRKTMRKD*