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PLM3_127_b2_sep16_scaffold_2433_7

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: comp(6070..6807)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 215.0
  • Bit_score: 203
  • Evalue 6.80e-50
DNA-directed RNA polymerase subunit alpha bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 209.0
  • Bit_score: 332
  • Evalue 2.60e-88
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 209.0
  • Bit_score: 334
  • Evalue 7.50e-89

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGAGCGCCCCGGAAATCCTCAAGGGGGTCTTCATGCTGGAGCTTCAGCTCCCCACCCGTCACGAATGGATCGCCCAGGAGCCGACCTACGGCAAGCTGGCCATCGAGGCCTTCGAGCGGGGCTTCGCCCTGACCGTCGGGAACGCCTATCGCCGGGTTCTGCTCTCCGCGATCCACGGGGCGGCCCCGACATGGGTCAAGATTACGGGCGTCCTCCACGAGTTCTCGCACCTGCCCGGCGTGACGGAAGACACCCTCGACATCATGCTCAATCTTCGCAAGGTGGTGTTCCAGTTGCACGTGAATCGGCCGAAGATCGTGCGCCTCCGGGCCCACGGGGTCGGCGTGGTCAAGGCGGGCGACTTCGAGTCCGACGCCGACGTGGAGATCCTCACCCCTGACGTCGTCCTGGCCACGCTCGACAAGGACGGCAGCGTGGAGATGGAAGTGTGCGTCGAGCGCGGGCGGGGTTACGCCGGGGCCGAGAAGCGGGAGCCCGAGGCGCTGCCCATCCACGCCATCCTCCTCGACGCCGATTTCTCTCCCGTCAAGCGGGTGAATCAGCACGTGGAGGAGATGGCGGACGGGCGTGAGCGCCTGGTCCTGGAGGTCTGGACCAACGGGGCCGTCGCCCCCGCGGTGGCCGTGGCCGAGNNNNNNNNNNNNNNNNNNNNNNNNCGACCTGCTCACCGACTTCCCCGAGACAACCCCGGTCGAGGAAAGCGTCGAGGTCGGTGA
PROTEIN sequence
Length: 246
VSAPEILKGVFMLELQLPTRHEWIAQEPTYGKLAIEAFERGFALTVGNAYRRVLLSAIHGAAPTWVKITGVLHEFSHLPGVTEDTLDIMLNLRKVVFQLHVNRPKIVRLRAHGVGVVKAGDFESDADVEILTPDVVLATLDKDGSVEMEVCVERGRGYAGAEKREPEALPIHAILLDADFSPVKRVNQHVEEMADGRERLVLEVWTNGAVAPAVAVAEXXXXXXXXRPAHRLPRDNPGRGKRRGR*