ggKbase home page

PLM3_127_b2_sep16_scaffold_4538_18

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 23162..23617

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 128.0
  • Bit_score: 184
  • Evalue 7.20e-44
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 127.0
  • Bit_score: 114
  • Evalue 2.00e-23
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 128.0
  • Bit_score: 184
  • Evalue 1.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCGCGACGACCGGGTTGAGATCTTCGTCCCTGACCTGCCTGAGCCGGCCAGCCACTACGTCCACGTGGTCCGCGCGGGCCAGATGATCTTCGTGTCGGGTTGTAGCGCCCTCGACGCCGCCGGGCACGTCGTCGGTGGCCGTGACGTGGTGGCCCAGACGCGCCAGGTCTTCGAGAATCTCCGGAAGTGCCTCGAGGCGGCAGGCGCGACGTTCGCCGACGTGTGCAAGGTGACGGTGTTCCTCCGCCACGGCACCGATCGCAGTCGGATCAACCCCGTGCGCCAGGAGTACTTCGGGACGACCAGGCCGGCGAGCACCTTGGTGGAGGTCGCGGGATTCTCGCGCGAGGACATCCTGGTGGAGATCGAGGCCATCGCGGTGGTGCCGTCCGCCACCTCGCCCTGGGCGGGGGGGCCACCGGGCGTCTTGCTTGAACCGCCCGAACACGCCTAG
PROTEIN sequence
Length: 152
MRDDRVEIFVPDLPEPASHYVHVVRAGQMIFVSGCSALDAAGHVVGGRDVVAQTRQVFENLRKCLEAAGATFADVCKVTVFLRHGTDRSRINPVRQEYFGTTRPASTLVEVAGFSREDILVEIEAIAVVPSATSPWAGGPPGVLLEPPEHA*