ggKbase home page

PLM3_127_b2_sep16_scaffold_15087_3

Organism: PLM3_127_b2_sep16_Dadabacteria_40_8

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(1797..2432)

Top 3 Functional Annotations

Value Algorithm Source
Sel1 repeat family protein bin=GWC2_Nitrospirae-rel_56_14 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 193.0
  • Bit_score: 118
  • Evalue 6.70e-24
msfA; vHiSLR1, Sel1-like repeat protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 120.0
  • Bit_score: 79
  • Evalue 1.30e-12
Tax=GWC2_Nitrospirae_56_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 193.0
  • Bit_score: 118
  • Evalue 9.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Nitrospirae_56_14_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 636
ATGATCAATCGCTTTGTAATAGGTTTTCTAAAATCCGGGACATTTACCTTATGGCTCTCAAATTTATTATTTATTCTTTTTTTGATTGGATGTGAGGAGGTTAAAAATATTCCAAGCCAATTGCCAAATCCTGTTAGAGACTTCATGGAGAAAGACAAGTATATAATTGGACTTCGGTGGTATGAATATGGCAACTACGATATAGCATTTAAATACTGGAAACCCCTTGCGGAAGATGGAGATTGCGACGCTGAGTTTAGCTTGGGTTTGCTATATTTTGAGGGTCGAGCTGTAGGAAAAAGCTATGAAACAGCCAAAGTTTGGTGGTTGAAGTCTGCTAACCAGGGACAGCCTGATGCACTACTTGGTCTTGGTGTCACTTTTTCTCACGAAGAAATCCCTTATAGTCCATTTAACTGTCGTGACGGCTGTGGTGCAGGAAAAAATCTTATTGAAGCGTATAAGTGGTCAAGCCTAGCGAACGAGATGGGATATGGGATTGAAAAGAGGCAGGCTGATAGGTTGTTAGAGAAGATTCGAGATCAGTTGTCGGCTGAGGACGTTAATGAGGGTGATAAGATAGTTGAGGAATGGAAACCGAGTCCATCCTTATGTGTACCGCGAAGTGGATTGTGA
PROTEIN sequence
Length: 212
MINRFVIGFLKSGTFTLWLSNLLFILFLIGCEEVKNIPSQLPNPVRDFMEKDKYIIGLRWYEYGNYDIAFKYWKPLAEDGDCDAEFSLGLLYFEGRAVGKSYETAKVWWLKSANQGQPDALLGLGVTFSHEEIPYSPFNCRDGCGAGKNLIEAYKWSSLANEMGYGIEKRQADRLLEKIRDQLSAEDVNEGDKIVEEWKPSPSLCVPRSGL*