ggKbase home page

PLM3_127_b2_sep16_scaffold_15264_4

Organism: PLM3_127_b2_sep16_Dadabacteria_40_8

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 2859..3722

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S03H2_S14093 {ECO:0000313|EMBL:GAH64304.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 267.0
  • Bit_score: 215
  • Evalue 5.90e-53
Uncharacterized protein bin=GWB2_Geobacter-like_52_12 species=Eubacterium hallii genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 304.0
  • Bit_score: 197
  • Evalue 1.20e-47
capsular polysaccharide biosynthesis protein CapK similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 265.0
  • Bit_score: 128
  • Evalue 1.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 864
GTGCTATTTATAAATGGCTACTCCGTGCGTCACAAGGTGATGGCCATCGTCTCACCAGATAAAACTACAAAAAAGGACAGTATCATTCAGCATTTTTGTCTCATGAGAAGACTGACAATAGATTACGTACGTCATTCTATCAAAGAAATTGTCGAGATTTTTCTCAAATACAAGCCAGAGGTTTTATACGGCCACCGCTCGCATCTTGACCTCATGGCTTTGGAATTGAAGCGACGTCGAATCAGACCAGAGGATTTGAGGTTGAAGCTTCTTTTGGGAGGTGCAGAAGTTGTTTATGACAGTAATCGTCGCCTCTACCTGGAGCAATTCGGTGTTAAACTAGTCGAGTTCTATGGATCTTGGGAGATAGGAATCATGGCTTACGAAACGCCAGCTCATAATGGACTCTATCTTAATAAAGATCTCACTTACTTCGAATTCCTCGACAAAGATGGAGAACCAGTTTCCCCTGGAAGACCTGGTAGGGTCGTGGTTACCGATCTAACTGGAAAGCTCATGCCATTTATTAGATATGATCAAGGGGATCTAGGGGTATTTGAGTATGGAGATGACGGGAACGGTAACCCTGTACGAAAGTTAACGCAGATCATCGGGCGTGAAGACGACTTTGTGCTACTACCCGATGGTACGCAGCGCTCCGCTTTTTACCTCTTGCGAACGCGGAGTTTATTCGAGGTATTAATTGTTACTGACACTTCTTATTTCCTCAGCATCAAAGATAAACTAAAGCAGCAGTTACAACAGAATTTTCCACAGACCGTAAGCTTTGAGATTGTCCAAGTGGACGAAATTCTTCCTGACTCTAGTGGAAAAATTAGAACGCTTGTTTCAGAGGCTAAGTAG
PROTEIN sequence
Length: 288
VLFINGYSVRHKVMAIVSPDKTTKKDSIIQHFCLMRRLTIDYVRHSIKEIVEIFLKYKPEVLYGHRSHLDLMALELKRRRIRPEDLRLKLLLGGAEVVYDSNRRLYLEQFGVKLVEFYGSWEIGIMAYETPAHNGLYLNKDLTYFEFLDKDGEPVSPGRPGRVVVTDLTGKLMPFIRYDQGDLGVFEYGDDGNGNPVRKLTQIIGREDDFVLLPDGTQRSAFYLLRTRSLFEVLIVTDTSYFLSIKDKLKQQLQQNFPQTVSFEIVQVDEILPDSSGKIRTLVSEAK*