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PLM3_127_b2_sep16_scaffold_114

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_114_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29469..29900)
DNA (432bp) protein (144aa)
MerR family transcriptional regulator Tax=Herbaspirillum sp. JC206 RepID=UPI0003003489
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_114_32
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30070..31074
DNA (1005bp) protein (335aa)
Zn-dependent hydrolase, glyoxylase Tax=Herbaspirillum sp. YR522 RepID=J2URM1_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_114_33
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31074..32159
DNA (1086bp) protein (362aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Methylthioribose-1-phosphate isomerase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIX3_AZOL4
mtnA; 5-methylthioribose-1-phosphate isomerase
PLM3_127_b2_sep16_scaffold_114_34
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32156..32821
DNA (666bp) protein (222aa)
class II aldolase/adducin-like protein (EC:4.1.2.17)
L-fuculose-phosphate aldolase Tax=Oceanibaculum indicum P24 RepID=K2IUB1_9PROT
Fuculose phosphate aldolase {ECO:0000313|EMBL:KJS34247.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
PLM3_127_b2_sep16_scaffold_114_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33128..34984
DNA (1857bp) protein (619aa)
Poly(R)-hydroxyalkanoic acid synthase Tax=Thauera phenylacetica B4P RepID=N6ZPZ2_9RHOO
poly(3-hydroxyalkanoate) synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_114_36
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35147..35734)
DNA (588bp) protein (196aa)
Putative uncharacterized protein Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SFI3_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93505.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_114_37
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36036..37001)
DNA (966bp) protein (322aa)
Magnesium and cobalt transport protein CorA Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBH1_ANADF
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_114_38
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37129..37974)
DNA (846bp) protein (282aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00035E9EC5
Uncharacterized protein {ECO:0000313|EMBL:EPZ17284.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
iron hydroxamate ABC transporter periplasmic protein
PLM3_127_b2_sep16_scaffold_114_39
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

38632..39429
DNA (798bp) protein (266aa)
hypothetical protein Tax=Mariprofundus ferrooxydans RepID=UPI00035ECB76
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_114_40
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40016..40468
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVM4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63830.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
cupin
PLM3_127_b2_sep16_scaffold_114_41
unknown

Not on your lists

40578..40706
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_114_42
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41057..41653
DNA (597bp) protein (199aa)
Putative uncharacterized protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47D45_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47236.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
PLM3_127_b2_sep16_scaffold_114_43
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41801..45301
DNA (3501bp) protein (1167aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KIF80213.1}; EC=1.2.7.8 {ECO:0000313|EMBL:KIF80213.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Indolepyruvate ferredoxin oxidoreductase Tax=Herbaspirillum frisingense GSF30 RepID=R0G3B6_9BURK
indolepyruvate ferredoxin oxidoreductase subunit alpha/beta
PLM3_127_b2_sep16_scaffold_114_44
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45481..48741
DNA (3261bp) protein (1087aa)
sbm1; methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase Tax=Herbaspirillum sp. JC206 RepID=UPI0002F7B69E
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIF80212.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
PLM3_127_b2_sep16_scaffold_114_45
unknown

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48789..49112
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_114_46
unknown

Not on your lists

49266..49661
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_114_47
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49916..51886
DNA (1971bp) protein (657aa)
acS2; putative Acetyl-coenzyme A synthetase (EC:6.2.1.1)
Putative Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CAL96063.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CAL96063.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Putative Acetyl-coenzyme A synthetase Tax=Azoarcus sp. (strain BH72) RepID=A1KB57_AZOSB
PLM3_127_b2_sep16_scaffold_114_48
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51921..52706
DNA (786bp) protein (262aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Beggiatoa alba B18LD RepID=I3CDX3_9GAMM
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EIJ41816.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
branched-chain amino acid ABC transporter ATPase
PLM3_127_b2_sep16_scaffold_114_49
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52847..53758
DNA (912bp) protein (304aa)
Inner-membrane translocator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y338_LEPCP
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_114_50
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53926..54990
DNA (1065bp) protein (355aa)
ABC transporter permease Tax=Variovorax paradoxus RepID=UPI000364B433
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EJL77913.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
inner-membrane translocator
PLM3_127_b2_sep16_scaffold_114_51
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55049..56377
DNA (1329bp) protein (443aa)
ABC transporter permease Tax=Caldimonas manganoxidans RepID=UPI00035FD22D
branched chain amino acid ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_114_52
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56487..57311
DNA (825bp) protein (275aa)
ABC transporter ATP-binding protein Tax=Azoarcus sp. (strain BH72) RepID=A1KB52_AZOSB
livF; ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_114_53
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57421..58656
DNA (1236bp) protein (412aa)
Coenzyme F390 synthetase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK83_AZOSU
coenzyme F390 synthetase
Coenzyme F390 synthetase {ECO:0000313|EMBL:AEV25516.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
PLM3_127_b2_sep16_scaffold_114_54
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58850..59437
DNA (588bp) protein (196aa)
Uncharacterized peroxidase-related enzyme Tax=Burkholderia RepID=E8YSV4_9BURK
peroxidase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_114_55
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59569..62229
DNA (2661bp) protein (887aa)
Pyruvate dehydrogenase E1 component Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC55_NITMU
aceE; pyruvate dehydrogenase subunit E1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_114_56
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62343..63665
DNA (1323bp) protein (441aa)
aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) (EC:2.3.1.12)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVR7_JANMA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_114_57
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63697..64362
DNA (666bp) protein (222aa)
Probable nicotinate-nucleotide adenylyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AZG9_9PROT
nicotinate-nucleotide adenylyltransferase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_114_58
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64352..64738
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS Tax=Sulfuricella denitrificans skB26 RepID=S6AAN5_9PROT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_114_59
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64761..65243
DNA (483bp) protein (161aa)
rlmH; rRNA large subunit m3Psi methyltransferase RlmH (EC:2.1.1.177)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
Ribosomal RNA large subunit methyltransferase H Tax=Burkholderia sp. Ch1-1 RepID=I2INY4_9BURK
PLM3_127_b2_sep16_scaffold_114_60
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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65294..65914
DNA (621bp) protein (207aa)
Maf-like protein AZOSEA22460 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Y2246_AROAE
nucleotide-binding protein implicated in inhibition of septum formation
Maf-like protein AZOSEA22460 {ECO:0000255|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying items 31-60 of 61 in total

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