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PLM3_127_b2_sep16_scaffold_137

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_137_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29528..29950)
DNA (423bp) protein (141aa)
Stringent starvation protein B Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAB7_NITMU
ClpXP protease specificity-enhancing factor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_137_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29947..30546)
DNA (600bp) protein (200aa)
Glutathione S-transferase-like protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAB6_NITMU
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_137_32
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30570..31295)
DNA (726bp) protein (242aa)
Cytochrome c1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAB5_NITMU
cytochrome c1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_137_33
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31292..32563)
DNA (1272bp) protein (424aa)
Cytochrome b Tax=Methylovorus RepID=C6X8R2_METSD
cytochrome b/b6 protein
Cytochrome b {ECO:0000256|RuleBase:RU003385}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
PLM3_127_b2_sep16_scaffold_137_34
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32568..33164)
DNA (597bp) protein (199aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
ubiquinol-cytochrome C reductase Tax=Thiobacillus denitrificans RepID=UPI00036EC4A7
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
PLM3_127_b2_sep16_scaffold_137_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33434..33850
DNA (417bp) protein (139aa)
OsmC family protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMM6_SIDLE
OsmC family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_137_36
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33860..34489)
DNA (630bp) protein (210aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Tax=Azoarcus sp. KH32C RepID=H0PY48_9RHOO
ubiquinone biosynthesis protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_137_37
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34497..34736)
DNA (240bp) protein (80aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM3_127_b2_sep16_scaffold_137_38
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34767..35090)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Acidithiobacillus caldus RepID=C6NS08_9GAMM
Rhodanese-like domain protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_137_39
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35395..36822)
DNA (1428bp) protein (476aa)
Peptidase M48, Ste24p Tax=Sulfuricella denitrificans skB26 RepID=S6B1T9_9PROT
peptidase M48, Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_137_40
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36941..37387
DNA (447bp) protein (149aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Sulfuricella denitrificans skB26 RepID=S6ABE8_9PROT
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
moaC; molybdenum cofactor biosynthesis protein C
PLM3_127_b2_sep16_scaffold_137_41
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37501..37809
DNA (309bp) protein (103aa)
cytochrome CBB3 Tax=Thiobacillus denitrificans RepID=UPI00037527F8
monoheme cytochrome SoxX
Sulfur oxidation protein SoxX {ECO:0000313|EMBL:AAZ96870.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PLM3_127_b2_sep16_scaffold_137_42
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37818..38288
DNA (471bp) protein (157aa)
Transmembrane protein SoxY Tax=Sulfuricella denitrificans skB26 RepID=S6AN33_9PROT
soxY; transmembrane protein SoxY
Transmembrane protein SoxY {ECO:0000313|EMBL:BAN36219.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_137_43
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38317..38631
DNA (315bp) protein (105aa)
sulfur oxidation protein Tax=Thiobacillus denitrificans RepID=UPI00036F0623
sulfur compound chelating protein SoxZ
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_137_44
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38642..39487
DNA (846bp) protein (282aa)
diheme cytochrome SoxA bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diheme cytochrome SoxA (sulfur oxidation)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PLM3_127_b2_sep16_scaffold_137_45
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39526..40977)
DNA (1452bp) protein (484aa)
pilus biosynthesis Tax=Pseudomonas fluorescens RepID=UPI000316C469
pilus biosynthesis
Pilus biosynthesis {ECO:0000313|EMBL:AHC33580.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
PLM3_127_b2_sep16_scaffold_137_46
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41246..41764)
DNA (519bp) protein (173aa)
Tfp pilus assembly protein major pilin PilA Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WS16_PSEDE
Tfp pilus assembly protein major pilin PilA
Tfp pilus assembly protein major pilin PilA {ECO:0000313|EMBL:AGI22868.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
PLM3_127_b2_sep16_scaffold_137_47
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42052..43689)
DNA (1638bp) protein (546aa)
Metal dependent phosphohydrolase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMU1_SIDLE
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_137_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43736..46126)
DNA (2391bp) protein (797aa)
Putative phytochrome sensor protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMU0_SIDLE
phytochrome sensor protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_137_49
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46223..46987)
DNA (765bp) protein (255aa)
Beta-lactamase domain protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMT8_SIDLE
beta-lactamase domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_137_50
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46990..49218)
DNA (2229bp) protein (743aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C07D9
adenylate/guanylate cyclase with Chase sensor
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM3_127_b2_sep16_scaffold_137_51
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49333..50169)
DNA (837bp) protein (279aa)
signal peptide protein Tax=Methyloversatilis universalis RepID=UPI0003702ACC
FHA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_137_52
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50182..51006)
DNA (825bp) protein (275aa)
Serine/threonine protein phosphatase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNK0_AZOSU
serine/threonine protein phosphatase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_137_53
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51020..53566)
DNA (2547bp) protein (849aa)
Serine/threonine protein kinase bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
serine/threonine protein kinase
Tax=GWE2_Gallionellales_58_10_curated
PLM3_127_b2_sep16_scaffold_137_54
unknown

Not on your lists

comp(53755..53880)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_137_55
unknown

Not on your lists

comp(53900..54040)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_137_56
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54236..54763)
DNA (528bp) protein (176aa)
Phosphoesterase PA-phosphatase related Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WXF2_METML
PA-phosphatase-like phosphoesterase
Tax=RBG_16_Betaproteobacteria_56_24_curated
PLM3_127_b2_sep16_scaffold_137_57
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54756..55955)
DNA (1200bp) protein (400aa)
Glycosyltransferase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QP08_AZOSU
glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_137_58
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56055..56438)
DNA (384bp) protein (128aa)
Diacylglycerol kinase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QP07_AZOSU
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:AEV24806.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
PLM3_127_b2_sep16_scaffold_137_59
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56420..57868)
DNA (1449bp) protein (483aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GCSPB_NITMU
Displaying items 31-60 of 62 in total

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