ggKbase home page

PLM3_127_b2_sep16_scaffold_178

Search features with annotation key words

Displaying items 31-60 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_178_31
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33185..34324
DNA (1140bp) protein (380aa)
Dehydrogenase, FMN-dependent Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RNJ1_9PROT
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:KFA93988.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
(S)-2-hydroxy-acid oxidase
PLM3_127_b2_sep16_scaffold_178_32
unknown

Not on your lists

34490..34816
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_33
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34981..35385
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH37345.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
PLM3_127_b2_sep16_scaffold_178_34
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35467..37488)
DNA (2022bp) protein (674aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DKZ3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU64126.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phage tail tape measure protein
PLM3_127_b2_sep16_scaffold_178_35
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37481..38056)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7Z8G5_LYSSH
Uncharacterized protein {ECO:0000313|EMBL:EON70403.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus OT4b.31.;"
PLM3_127_b2_sep16_scaffold_178_36
unknown

Not on your lists

comp(38053..38238)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_37
unknown

Not on your lists

comp(38262..38744)
DNA (483bp) protein (161aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_38
unknown

Not on your lists

comp(38741..39004)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_39
unknown

Not on your lists

comp(39161..39352)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_40
unknown

Not on your lists

comp(39548..39769)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_41
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(39781..40902)
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Pseudomonas stutzeri RepID=UPI0002F7CAF9
phage-like protein
Tax=RBG_16_Nitrospirae_43_11_curated
PLM3_127_b2_sep16_scaffold_178_42
unknown

Not on your lists

comp(41304..41741)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_43
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41794..43983)
DNA (2190bp) protein (730aa)
Phage terminase large subunit (GpA) Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGF7_9PROT
phage terminase large subunit family protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_127_b2_sep16_scaffold_178_44
unknown

Not on your lists

comp(43996..44352)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_45
unknown

Not on your lists

comp(44375..44974)
DNA (600bp) protein (200aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_46
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45265..46677)
DNA (1413bp) protein (471aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037C0DB1
Uncharacterized protein {ECO:0000313|EMBL:EQA99110.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_178_47
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46674..47663)
DNA (990bp) protein (330aa)
MT-A70 family protein Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X6N0_SINMM
MT-A70 family protein
MT-A70 family protein {ECO:0000313|EMBL:AEH78722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
PLM3_127_b2_sep16_scaffold_178_48
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47660..47860)
DNA (201bp) protein (67aa)
Prophage CP4-57 regulatory Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CY2_DECAR
prophage CP4-57 regulatory
Prophage CP4-57 regulatory {ECO:0000313|EMBL:AAZ47299.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
PLM3_127_b2_sep16_scaffold_178_49
unknown

Not on your lists

comp(47965..48516)
DNA (552bp) protein (184aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_50
unknown

Not on your lists

comp(48516..48959)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_51
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49039..50268)
DNA (1230bp) protein (410aa)
integrase Tax=Arhodomonas aquaeolei RepID=UPI0003616979
putative integrase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_178_trna_1
unknown

Not on your lists

comp(50438..50511)
DNA (74bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_178_52
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50674..52578)
DNA (1905bp) protein (635aa)
RNA polymerase sigma factor RpoD Tax=Nitrosospira sp. APG3 RepID=M5DVC8_9PROT
RNA polymerase sigma factor RpoD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_178_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52662..54413)
DNA (1752bp) protein (584aa)
DNA primase Tax=Sulfuricella denitrificans skB26 RepID=S6AAU9_9PROT
DNA primase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_178_54
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54693..55139)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJ18_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_178_55
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55233..55499)
DNA (267bp) protein (89aa)
30S ribosomal protein S21 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKY8_ACCPU
rpsU; 30S ribosomal protein S21
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_178_56
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


55621..56649
DNA (1029bp) protein (343aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=TSAD_CHRVO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_178_57
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56627..57235)
DNA (609bp) protein (203aa)
glycerol-3-phosphate acyltransferase Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037C8C6A
h16_A0588; glycerol-3-phosphate acyltransferase PlsY
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM3_127_b2_sep16_scaffold_178_58
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57258..58154)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP38_SIDLE
tyrosine recombinase XerD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_178_59
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58154..58639)
DNA (486bp) protein (162aa)
Methylated-DNA/protein-cysteine methyltransferase Tax=Nitrosomonas sp. AL212 RepID=F9ZIG7_9PROT
methylated-DNA--protein-cysteine methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 31-60 of 84 in total

View Taxonomy