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PLM3_127_b2_sep16_scaffold_188

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_188_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23820..25808)
DNA (1989bp) protein (663aa)
Cytochrome c heme lyase subunit CcmF Tax=Nitrosospira sp. APG3 RepID=M5DI48_9PROT
cytochrome c-type biogenesis protein CcmF
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_188_32
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26016..26480)
DNA (465bp) protein (155aa)
Cytochrome c-type biogenesis protein CcmE Tax=Nitrosospira sp. APG3 RepID=M5DSA2_9PROT
CcmE/CycJ protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_188_33
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26487..26660)
DNA (174bp) protein (58aa)
Heme exporter protein CcmD Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKW7_AZOSU
heme exporter protein CcmD
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_188_34
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26906..27574)
DNA (669bp) protein (223aa)
Heme exporter protein CcmC Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEX8_NITSI
heme exporter protein CcmC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_188_35
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27832..28497)
DNA (666bp) protein (222aa)
Heme exporter protein B Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q2_NITMU
heme exporter protein CcmB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_188_36
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28513..29136)
DNA (624bp) protein (208aa)
cytochrome C biogenesis protein CcmA Tax=Lamprocystis purpurea RepID=UPI00036BE0C6
heme ABC transporter ATP-binding protein CcmA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_188_37
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29147..30079)
DNA (933bp) protein (311aa)
Oxidative stress transcriptional regulator Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGH4_THIDA
oxidative stress transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
PLM3_127_b2_sep16_scaffold_188_38
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30401..31126
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QKM5_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90658.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_39
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31182..32306
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QHX7_RALPI
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_188_40
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32347..32805
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QI15_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90660.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_41
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32942..34378
DNA (1437bp) protein (479aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QN15_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90661.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_42
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34375..36072
DNA (1698bp) protein (566aa)
Peptidase S41 Tax=Ralstonia pickettii DTP0602 RepID=U3QRF5_RALPI
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AGW90662.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_43
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36082..36237
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QKN4_RALPI
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_188_44
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36230..36430
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QHY2_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90664.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_45
unknown

Not on your lists

36456..36551
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_188_46
unknown

Not on your lists

36559..36654
DNA (96bp) protein (32aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QN21_RALPI
hypothetical protein
PLM3_127_b2_sep16_scaffold_188_47
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36688..37458
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QRG0_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90667.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_48
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37461..39575
DNA (2115bp) protein (705aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QKN9_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90668.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_127_b2_sep16_scaffold_188_49
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39608..40171
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QHY6_RALPI
Electron transporter SenC {ECO:0000313|EMBL:EYS86804.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_188_50
unknown

Not on your lists

comp(40307..40720)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_188_trna_1
unknown

Not on your lists

comp(41588..41678)
DNA (91bp)
transferRNA Ser
PLM3_127_b2_sep16_scaffold_188_51
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41717..43204
DNA (1488bp) protein (496aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Membrane-bound lytic murein transglycosylase F Tax=Sulfuricella denitrificans skB26 RepID=S6AG96_9PROT
family 3 extracellular solute-binding protein
PLM3_127_b2_sep16_scaffold_188_52
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43209..44543)
DNA (1335bp) protein (445aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
seryl-tRNA synthetase (EC:6.1.1.11)
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
PLM3_127_b2_sep16_scaffold_188_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44600..45913)
DNA (1314bp) protein (438aa)
ATPase AAA Tax=Sulfuricella denitrificans skB26 RepID=S6AK90_9PROT
ATPase AAA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_188_54
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46113..46733)
DNA (621bp) protein (207aa)
Outer-membrane lipoprotein carrier protein Tax=Sulfuricella denitrificans skB26 RepID=S6ABU4_9PROT
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_188_55
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46733..47323)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WZ64_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_188_56
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47425..49722)
DNA (2298bp) protein (766aa)
Cell division protein FtsK Tax=Nitrosospira sp. APG3 RepID=M5DH72_9PROT
Cell division protein FtsK {ECO:0000313|EMBL:KIO49641.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cell division FtsK/SpoIIIE
PLM3_127_b2_sep16_scaffold_188_57
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49862..50821
DNA (960bp) protein (320aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:KIO49510.1}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase Tax=Nitrosospira sp. APG3 RepID=M5DHE9_9PROT
PLM3_127_b2_sep16_scaffold_188_58
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51040..51633
DNA (594bp) protein (198aa)
Smr domain Tax=Nitrosospira sp. APG3 RepID=M5DH44_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_188_59
unknown

Not on your lists

51880..51990
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying items 31-60 of 60 in total

View Taxonomy