ggKbase home page

PLM3_127_b2_sep16_scaffold_333_36

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(44559..46256)

Top 3 Functional Annotations

Value Algorithm Source
Dihydroxy-acid dehydratase Tax=Hydrocarboniphaga effusa AP103 RepID=I8I311_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 554.0
  • Bit_score: 873
  • Evalue 7.30e-251
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 557.0
  • Bit_score: 854
  • Evalue 1.00e-245
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 557.0
  • Bit_score: 920
  • Evalue 9.60e-265

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_65_24 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGGCAGATAACTGGCGCAGCAAATTGATCACCGCGGGTGTGGCCCGCTCGCCCAACCGCGCGATGCTTCGCGCCGTCGATTTCAAGGACGGTGATTTCGACAAGCCGATCGTCGGCGTGGCCAACGGGTACTCCAACATGAACCCCTGCAATGCCGGCATCCAGCCGCTGGTGGATCGTGCCATGCGGGCGCTGCGTGAGGCCGGAGCGATGCCGCAGGTGTTCGGCACGCCCACCGTCACCGACGGCATCGGCATGGGCACCGACGGCATGAAGTACTCGCTGGTGTCGCGCGAGGTGATCGCCGACGCCATCGAAACCGCGGTCAACGGACAGATGATGGACGGAGCCCTGGTGATCGGCGCCTGCGACAAGAATATGCCCGGCGGAATGATGGCAATGGCGCGTATGAACGTGCCGGCAATTTATGTATACGGCGGCACCATCAAGCCGGGCAACTGGAAGGGTCAGCCCCTGACCATCGCCAGCGCCTTCGAGGCAGTGGGCGCGTTTACCGCCGGCAAGTTGAGCCAGGAGGACTTCGACGGCATCGAGAGGAACGCCTGTCCGACCGTGGGCGCGTGCGGCGGCATGTTCACCGCCAACACCATGTCGTCCTCGTTCGAGGCTCTCGGACTGAGCCTGCTGGGCTCCTCGCAACTTGCGGCAACCGACCCGGAAAAGGCCGACTCCGCCGCCGACTCGGCGCGCGTGCTGGTGAACGCGATCAGGAAGAACATCCGCCCGCGCAACATCATCACCCGCAAGTCCATCGAGAACGTCGTCAGCCTGGTGATGGCCACCGGCGGCTCGACCAATGCGGTGCTGCATTACCTGGCGATTGCGTCGGCCGCGGAGGTCGAATGGACCATCGATGATTTCGAACGCATCCGCCGCAAGGTGCCGGTGCTCTGTGACCTCAAGCCTTCGGGAAAGTATGTTGCGGTGGACTTCCACAAGGCCGGGGGCGTGCCGCAAGTGCTGAAGATGCTGCTGGTCAATGGACTGCTGCACGGCGACTGCATGACCATCACCGGCCGCACCATCGGCGAGGAACTGGAGAACATCCCCGCCGAGCCGCGGCGCGACCAGGACGTAATCCGTCCGTTCAGCGCGCCGTTGTACAAGCAGGGTCACCTCGCCATTCTCAGGGGCAATCTGGCGCCGGAGGGCTGTGTAGCCAAGATCACCGGGCTGAAGAATCCGGTCATCACCGGGCCGGCGCGGGTGTTCGACTCCGAGAAGCAGACCATGGAGGCAATCATGGCCAAGAAGATCAAGGCCGGCGACGTGGTGGTGATCCGCTACGAGGGTCCGAAGGGCGGGCCGGGCATGCAGGAAATGCTATCGCCGACTTCGGCGCTGATCGGCCAGGGACTCGGCGACTCGGTCGGCCTGCTCACCGACGGCCGTTTCTCGGGCGCGACCTGGGGCATGGTGGTCGGCCATGTCGCCCCGGAGGCCTTCGCCGGCGGCACCATTGCGCTGGTGAAGGAGGGCGACTCGATCACCATCGACGCGCACAAGCAACTGATCCAGCTCAATGTGCCCGAAGAAGAACTGGCCAGGCGCCGCGCCGCGTGGAAGCAGCCCAAGCCGCGTTTCAGCCGCGGCCTGCTGGCGAAGTACACGCACCTGGTGTCCACCGCATCGGTCGGCGCGGTGACGGATCTGGGACTGTTCGAGGAAAAAAAATAG
PROTEIN sequence
Length: 566
MADNWRSKLITAGVARSPNRAMLRAVDFKDGDFDKPIVGVANGYSNMNPCNAGIQPLVDRAMRALREAGAMPQVFGTPTVTDGIGMGTDGMKYSLVSREVIADAIETAVNGQMMDGALVIGACDKNMPGGMMAMARMNVPAIYVYGGTIKPGNWKGQPLTIASAFEAVGAFTAGKLSQEDFDGIERNACPTVGACGGMFTANTMSSSFEALGLSLLGSSQLAATDPEKADSAADSARVLVNAIRKNIRPRNIITRKSIENVVSLVMATGGSTNAVLHYLAIASAAEVEWTIDDFERIRRKVPVLCDLKPSGKYVAVDFHKAGGVPQVLKMLLVNGLLHGDCMTITGRTIGEELENIPAEPRRDQDVIRPFSAPLYKQGHLAILRGNLAPEGCVAKITGLKNPVITGPARVFDSEKQTMEAIMAKKIKAGDVVVIRYEGPKGGPGMQEMLSPTSALIGQGLGDSVGLLTDGRFSGATWGMVVGHVAPEAFAGGTIALVKEGDSITIDAHKQLIQLNVPEEELARRRAAWKQPKPRFSRGLLAKYTHLVSTASVGAVTDLGLFEEKK*