ggKbase home page

PLM3_127_b2_sep16_scaffold_21405_5

Organism: PLM3_127_b2_sep16_Chloroflexi_62_8

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2440..3567

Top 3 Functional Annotations

Value Algorithm Source
putative ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5] bin=CNBR_ACIDO species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 373.0
  • Bit_score: 412
  • Evalue 4.00e-112
putative ribonuclease D (EC:3.1.13.5) similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 366.0
  • Bit_score: 335
  • Evalue 1.40e-89
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 268.0
  • Bit_score: 399
  • Evalue 3.80e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1128
GTGCTTGAACTGCCCCCACCTACCCTCGTCGCCGACAAGCGCGGTTTGAAAAGCCTCCTCGCCGCGCTCGCCCAGGAGTTGGTGGTTGCGGTGGATACCGAGTCCAACAGCTTGTTTGCCTACCGCGAGCGCGTGTGCCTGATCCAGTTCTCGACCCTGTCTCACGATTACATCCTCGACCCCCTCGCCCTGCCCGACCTGAGTGCGCTCGGCCCTCTATTCGTCAACGCGCAGCAGGAAAAAATTTTCCACGCCGCCGAATACGACCTCATCTGCCTCAAGCGCGATTACGGCTTTGAATTCGCCAACCTGTTCGACACGATGATCGCCGCGCGCACGCTGGGCTGGCCGCAGATGGGGCTGGCCGCCATCCTCGAAACGCGCTTTGGGGTGAAGATGGACAAACGCTTCCAGCGCGCCGACTGGGGCCAGCGTCCCCTCACCCCGGCCCAGCTCAACTACGCCCGGCTCGACACGCACTACCTGCTGTCGCTGCGCGAGATCCTCTCGGCGGAATTGATGGCCCAGGACCGGATGGAAGAAGCCCAGGAGGAATTCTATCGCGTGATGCGGGCGTCCGCCGATCCGGCCTTGCCCAATGCCTCGAGCTTCTGGCGCATCTCTGGAGCGCGTGACCTCCCGCCCTCGCAGGCCAGCGTGCTGCGCGAGCTGTATCTTTACCGCGAGCGCCAGGCCGAGCGCGCTAATCGCCCGCCCTTTAAGATCATGGGCGACCAGACTCTGCTGGAGGTCGCGCGGCGCTGTCCCAAGCAAAGCTCCGAGTTGGAGCGCATCAACGGGATGACACCCGCCCAAATCCGCCGCCACGCGGTCGGCCTCCTGCGGGCGGTGCAGCAGGGCCTCGCCAGTTCTCCGCTACATCCGCCGCCGTTTGCGCGTGAACCCGACGAGGTGCGCGAACGTTACGACCGCCTGCACCAGTGGCGCAAGCAAACCGCCCAGGCGCGCGGCGTCGAATCGGACGTGATCGTGCCGCGCGAGGTGTTGTGGGAGCTGGCCCGCCGCGCCCCACGCACCCCGGACGAGTTGCAGCACATCGAGAACCTGGGCCCGTGGCGAAGGCAAACGTACGGGGCGGAGATATTGAAAGTGTTGAGTGAGGCGTAA
PROTEIN sequence
Length: 376
VLELPPPTLVADKRGLKSLLAALAQELVVAVDTESNSLFAYRERVCLIQFSTLSHDYILDPLALPDLSALGPLFVNAQQEKIFHAAEYDLICLKRDYGFEFANLFDTMIAARTLGWPQMGLAAILETRFGVKMDKRFQRADWGQRPLTPAQLNYARLDTHYLLSLREILSAELMAQDRMEEAQEEFYRVMRASADPALPNASSFWRISGARDLPPSQASVLRELYLYRERQAERANRPPFKIMGDQTLLEVARRCPKQSSELERINGMTPAQIRRHAVGLLRAVQQGLASSPLHPPPFAREPDEVRERYDRLHQWRKQTAQARGVESDVIVPREVLWELARRAPRTPDELQHIENLGPWRRQTYGAEILKVLSEA*