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PLM3_127_b2_sep16_scaffold_278_8

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6681..7913)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma subunit, ECF subfamily Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K3M0_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 394.0
  • Bit_score: 577
  • Evalue 6.00e-162
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK37065.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 404.0
  • Bit_score: 628
  • Evalue 5.50e-177
putative RNA polymerase, sigma subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 394.0
  • Bit_score: 577
  • Evalue 1.70e-162

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
GTGAGCACGGCGACCGGGGCCGAGGACCTGCTGCGGGAGCTGGCGCCGCAGGTCCTCGGCGCCCTCGTACGGCGCTACGGCGGCTTCGACACCTGCGAGGACGCGGTGCAGGAGGCCCTGCTGGCGGCCGCGGTCCAGTGGCCGACTGAAGGTGTGCCTGGCAACCCGAAGGGTTGGTTGGTCACGGTCGCGTCCCGTCGGCGGACCGAGCTGTGGCGCAACGACTCGGCCCGCCGACGCCGGGAGGAGACCGCCGCCGCACTGGCACCGCCGGACCCCGAGCCCGCACCGGCCGTGGACGACACGCTCACCCTGCTGCTGCTGTGCTGCCACCCGTCGCTCACCCCGGTGTCCCAGGTGGCCCTTATGTTGCGCGCCGTCGGCGGGCTGAGCACCGCAGAGATCGCCCGCGCGTTCCTGGTCCCGGAGGCGACCGTGGCCCAGCGCATCAGCCGGGCGAAACAGCGGGTCAAGACCAGCGGCGCCGAGTTCCGGCTGCCCCCGCAGGCCGAACGTTCCGAGCGGATGGTTGCGGTGCTGCACGTGCTGTACCTGATCTTCAACGAGGGCTACACCGCCAGCTCCGGGCCCTCGCTGCATCGCGTCGAGCTCACCAGCGAGGCGATCCGCCTGACCCGCCAGCTCCGCGACCTGCTGCCCGAGGACGGCGAGGTCGCCGGGCTCCTCGCGCTCATGCTGCTCACCGACGCCCGCCGCCCGGCGCGGACCCGCCCAGACGGTGGCCTGGTCCCGCTCGCGGAGCAGGACCGTCGCCAGTGGGACGCCCAGGCCATCGCCGAAGGTATCGGCCTGATCACCCAGACGCTGGCCAGCGCGCCGGTCGGCCCCTACCAGCTGCAGGCCGCGATCGCCGCCGTGCACGACGAGGCCCCCCGCTCCGAGGACACCGACTGGCGGCAGATCCTCGGACTGTACGAGCTGCTGCACAGCATCGCGCCCGGACCGATGGTCACCCTCAACCGCATCGTCGCCGTCGCAATGGTCCACGGCCCACAGGCCGGCCTGGAGCAGCTTGCCGCGGCGGAGGCCGACCCCGCACTCGCCGGGCACCACCGAGTCGACGCCGTCCGCGCACACCTGCTCGACATCGCCGGTGACCAGGAGGCGGCACGTGCCCACTACCGCCTGGCCGCACGCCGCACACTCAGCGTCCCCGAGCAGCGCTACCTCGAGTCCCGCGCCGCACAACTCACGCCGCCAAGTCGGGCATGA
PROTEIN sequence
Length: 411
VSTATGAEDLLRELAPQVLGALVRRYGGFDTCEDAVQEALLAAAVQWPTEGVPGNPKGWLVTVASRRRTELWRNDSARRRREETAAALAPPDPEPAPAVDDTLTLLLLCCHPSLTPVSQVALMLRAVGGLSTAEIARAFLVPEATVAQRISRAKQRVKTSGAEFRLPPQAERSERMVAVLHVLYLIFNEGYTASSGPSLHRVELTSEAIRLTRQLRDLLPEDGEVAGLLALMLLTDARRPARTRPDGGLVPLAEQDRRQWDAQAIAEGIGLITQTLASAPVGPYQLQAAIAAVHDEAPRSEDTDWRQILGLYELLHSIAPGPMVTLNRIVAVAMVHGPQAGLEQLAAAEADPALAGHHRVDAVRAHLLDIAGDQEAARAHYRLAARRTLSVPEQRYLESRAAQLTPPSRA*