ggKbase home page

PLM3_127_b2_sep16_scaffold_200_48

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 47879..48160

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial Tax=Nocardiopsis halotolerans RepID=UPI00036D9EB9 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 90.0
  • Bit_score: 119
  • Evalue 1.70e-24
RNA polymerase, sigma-24 subunit, ecf subfamily protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 91.0
  • Bit_score: 117
  • Evalue 1.40e-24
RNA polymerase, sigma-24 subunit, ecf subfamily protein {ECO:0000313|EMBL:AEB45347.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 91.0
  • Bit_score: 117
  • Evalue 7.10e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGCTACGGGCCGACGGCGGCACGGCGCGCGCCCGCCAGACCGTCGTGATCCACGGCGCGCGGGCCGTGGCCGCACAAGCGGTCACCGGCACGCGGTTCGCCCCGTTCGTGCGACCGGCGCTGATCAACGGAACCGCCGGAGTCATAGTCGCTGCGGGCGGGCGGGCGTTGTCGGTCATGGGCTTCACCGTTGCGCACGGGAAGATCGTCGCTATCGACGTGCTCTACGACCCCGAACGCCTGGCCGACCTCGACCTGGCAGTCTTCGATGACTCACCGTGA
PROTEIN sequence
Length: 94
VLRADGGTARARQTVVIHGARAVAAQAVTGTRFAPFVRPALINGTAGVIVAAGGRALSVMGFTVAHGKIVAIDVLYDPERLADLDLAVFDDSP*